RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 SOD2P04179 222 aa24.43■■□□□ 1.5
BRF1-216ENST00000550208 CTSAP10619 480 aa24.43■■□□□ 1.5
BRF1-216ENST00000550208 BMP6P22004 513 aa24.43■■□□□ 1.5
BRF1-216ENST00000550208 LRPAP1P30533 357 aa24.43■■□□□ 1.5
BRF1-216ENST00000550208 MORC3Q14149 939 aa24.43■■□□□ 1.5
BRF1-216ENST00000550208 SNRNP35Q16560 246 aaKnown RBP24.43■■□□□ 1.5
BRF1-216ENST00000550208 COBLL1Q53SF7 1204 aa24.43■■□□□ 1.5
BRF1-216ENST00000550208 SLC9A9Q8IVB4 645 aa24.43■■□□□ 1.5
BRF1-216ENST00000550208 MRPL43Q8N983 215 aaKnown RBP24.43■■□□□ 1.5
BRF1-216ENST00000550208 BEST2Q8NFU1 509 aa24.43■■□□□ 1.5
BRF1-216ENST00000550208 HERC2P3Q9BVR0 1158 aa24.43■■□□□ 1.5
BRF1-216ENST00000550208 GTPBP4Q9BZE4 634 aaKnown RBP24.43■■□□□ 1.5
BRF1-216ENST00000550208 C2CD2Q9Y426 696 aa24.43■■□□□ 1.5
BRF1-216ENST00000550208 TMEM189-UBE2V1I3L0A0 370 aa24.42■■□□□ 1.5
BRF1-216ENST00000550208 XPOTO43592 962 aaKnown RBP24.42■■□□□ 1.5
BRF1-216ENST00000550208 GTF2F1P35269 517 aaKnown RBP eCLIP24.42■■□□□ 1.5
BRF1-216ENST00000550208 SMC1AQ14683 1233 aaKnown RBP24.42■■□□□ 1.5
BRF1-216ENST00000550208 RBM23Q86U06 439 aaKnown RBP24.42■■□□□ 1.5
BRF1-216ENST00000550208 ADSSL1Q8N142 457 aa24.42■■□□□ 1.5
BRF1-216ENST00000550208 TMEM174Q8WUU8 243 aa24.42■■□□□ 1.5
BRF1-216ENST00000550208 FAM84AQ96KN4 292 aa24.42■■□□□ 1.5
BRF1-216ENST00000550208 B3GALT6Q96L58 329 aa24.42■■□□□ 1.5
BRF1-216ENST00000550208 IGFLR1Q9H665 355 aa24.42■■□□□ 1.5
BRF1-216ENST00000550208 C2orf71A6NGG8 1288 aa24.41■■□□□ 1.5
BRF1-216ENST00000550208 PER2O15055 1255 aa24.41■■□□□ 1.5
BRF1-216ENST00000550208 CD44P16070 742 aaKnown RBP24.41■■□□□ 1.5
BRF1-216ENST00000550208 CA8P35219 290 aa24.41■■□□□ 1.5
BRF1-216ENST00000550208 BRCC3P46736 316 aa24.41■■□□□ 1.5
BRF1-216ENST00000550208 HYAL1Q12794 435 aa24.41■■□□□ 1.5
BRF1-216ENST00000550208 MYBPC2Q14324 1141 aa24.41■■□□□ 1.5
BRF1-216ENST00000550208 MFSD14AQ96MC6 490 aa24.41■■□□□ 1.5
BRF1-216ENST00000550208 TLE6Q9H808 572 aa24.41■■□□□ 1.5
BRF1-216ENST00000550208 CHST7Q9NS84 486 aa24.41■■□□□ 1.5
BRF1-216ENST00000550208 DPP3Q9NY33 737 aa24.41■■□□□ 1.5
BRF1-216ENST00000550208 STK39Q9UEW8 545 aa24.41■■□□□ 1.5
BRF1-216ENST00000550208 I3L4J1 428 aa24.4■■□□□ 1.5
BRF1-216ENST00000550208 PPEF2O14830 753 aa24.4■■□□□ 1.5
BRF1-216ENST00000550208 LILRB3O75022 631 aa24.4■■□□□ 1.5
BRF1-216ENST00000550208 CASP4P49662 377 aa24.4■■□□□ 1.5
BRF1-216ENST00000550208 TFAMQ00059 246 aaKnown RBP24.4■■□□□ 1.5
BRF1-216ENST00000550208 CYP24A1Q07973 514 aa24.4■■□□□ 1.5
BRF1-216ENST00000550208 BMS1Q14692 1282 aaKnown RBP24.4■■□□□ 1.5
BRF1-216ENST00000550208 SKIV2LQ15477 1246 aaKnown RBP24.4■■□□□ 1.5
BRF1-216ENST00000550208 USP41Q3LFD5 358 aa24.4■■□□□ 1.5
BRF1-216ENST00000550208 ZCWPW2Q504Y3 356 aa24.4■■□□□ 1.5
BRF1-216ENST00000550208 FAM171A1Q5VUB5 890 aa24.4■■□□□ 1.5
BRF1-216ENST00000550208 KIAA0319Q5VV43 1072 aa24.4■■□□□ 1.5
BRF1-216ENST00000550208 LMBRD2Q68DH5 695 aaPredicted RBP24.4■■□□□ 1.5
BRF1-216ENST00000550208 CENPPQ6IPU0 288 aa24.4■■□□□ 1.5
BRF1-216ENST00000550208 NT5DC4Q86YG4 428 aa24.4■■□□□ 1.5
BRF1-216ENST00000550208 NUP62CLQ9H1M0 184 aa24.4■■□□□ 1.5
BRF1-216ENST00000550208 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.4■■□□□ 1.5
BRF1-216ENST00000550208 SF3B1O75533 1304 aaKnown RBP eCLIP24.39■■□□□ 1.57e-6■■■■■ 33.4
BRF1-216ENST00000550208 PPP1R3GB7ZBB8 358 aa24.39■■□□□ 1.49
BRF1-216ENST00000550208 C2CD2LO14523 706 aa24.39■■□□□ 1.49
BRF1-216ENST00000550208 MCM4P33991 863 aa24.39■■□□□ 1.49
BRF1-216ENST00000550208 NRIP1P48552 1158 aa24.39■■□□□ 1.49
BRF1-216ENST00000550208 SURF1Q15526 300 aa24.39■■□□□ 1.49
BRF1-216ENST00000550208 PTPN14Q15678 1187 aa24.39■■□□□ 1.49
BRF1-216ENST00000550208 NFIL3Q16649 462 aa24.39■■□□□ 1.49
BRF1-216ENST00000550208 C9orf57Q5W0N0 161 aa24.39■■□□□ 1.49
BRF1-216ENST00000550208 ANKRD40Q6AI12 368 aa24.39■■□□□ 1.49
BRF1-216ENST00000550208 SCARA3Q6AZY7 606 aa24.39■■□□□ 1.49
BRF1-216ENST00000550208 CACTINQ8WUQ7 758 aaKnown RBP24.39■■□□□ 1.49
BRF1-216ENST00000550208 CCDC127Q96BQ5 260 aa24.39■■□□□ 1.49
BRF1-216ENST00000550208 POP1Q99575 1024 aaKnown RBP24.39■■□□□ 1.49
BRF1-216ENST00000550208 PRDM6Q9NQX0 595 aa24.39■■□□□ 1.49
BRF1-216ENST00000550208 MRPL17Q9NRX2 175 aaKnown RBP24.39■■□□□ 1.49
BRF1-216ENST00000550208 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.38■■□□□ 1.49
BRF1-216ENST00000550208 PIRO00625 290 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 SLC34A2O95436 690 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 NR2F2P24468 414 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 GLUD2P49448 558 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 PMS1P54277 932 aaKnown RBP24.38■■□□□ 1.49
BRF1-216ENST00000550208 DSG1Q02413 1049 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 ELAVL2Q12926 359 aaKnown RBP24.38■■□□□ 1.49
BRF1-216ENST00000550208 ADAM9Q13443 819 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 PSMD6Q15008 389 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 CEP135Q66GS9 1140 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 KIAA1841Q6NSI8 718 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 CEP57Q86XR8 500 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 PLEKHO2Q8TD55 490 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 PPP2R3CQ969Q6 453 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 DHTKD1Q96HY7 919 aaPredicted RBP24.38■■□□□ 1.49
BRF1-216ENST00000550208 INTS13Q9NVM9 706 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 NUB1Q9Y5A7 615 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 IRAK3Q9Y616 596 aa24.38■■□□□ 1.49
BRF1-216ENST00000550208 PTPRJQ12913 1337 aa24.37■■□□□ 1.49
BRF1-216ENST00000550208 ANO9A1A5B4 782 aa24.37■■□□□ 1.49
BRF1-216ENST00000550208 URODP06132 367 aa24.37■■□□□ 1.49
BRF1-216ENST00000550208 RPL13P26373 211 aaKnown RBP24.37■■□□□ 1.49
BRF1-216ENST00000550208 STIM1Q13586 685 aa24.37■■□□□ 1.49
BRF1-216ENST00000550208 DUSP6Q16828 381 aa24.37■■□□□ 1.49
BRF1-216ENST00000550208 EDRF1Q3B7T1 1238 aa24.37■■□□□ 1.49
BRF1-216ENST00000550208 RTP2Q5QGT7 225 aa24.37■■□□□ 1.49
BRF1-216ENST00000550208 TRIML1Q8N9V2 468 aa24.37■■□□□ 1.49
BRF1-216ENST00000550208 OR5B17Q8NGF7 314 aa24.37■■□□□ 1.49
BRF1-216ENST00000550208 RIN2Q8WYP3 895 aaPredicted RBP24.37■■□□□ 1.49
BRF1-216ENST00000550208 GZF1Q9H116 711 aaPredicted RBP24.37■■□□□ 1.49
BRF1-216ENST00000550208 TRIM49BA6NDI0 452 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms