RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 DHX34Q14147 1143 aaKnown RBP10.69□□□□□ -0.7
RAB5B-206ENST00000549505 ZBTB41Q5SVQ8 909 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 OLFML2BQ68BL8 750 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 GPR142Q7Z601 462 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 TXLNGYQ9BZA5 131 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 ABHD16BQ9H3Z7 469 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 PDCD11Q14690 1871 aaKnown RBP10.69□□□□□ -0.7
RAB5B-206ENST00000549505 MBLAC1A4D2B0 266 aaPredicted RBP10.69□□□□□ -0.7
RAB5B-206ENST00000549505 TTLL13PA6NNM8 815 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 GLI1P08151 1106 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 CXCR5P32302 372 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 HSPA9P38646 679 aaKnown RBP10.69□□□□□ -0.7
RAB5B-206ENST00000549505 PIK3CAP42336 1068 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 ADAM17P78536 824 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 PAK2Q13177 524 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 GPS2Q13227 327 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 DUOXA2Q1HG44 320 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 MARCH8Q5T0T0 291 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 LHX5Q9H2C1 402 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 PDGFCQ9NRA1 345 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 TRPC6Q9Y210 931 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 CCL15-CCL14A0A0B4J2E2 113 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 A6NJR5 290 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 AGPSO00116 658 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 HAS3O00219 553 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 MEFVO15553 781 aaPredicted RBP10.69□□□□□ -0.7
RAB5B-206ENST00000549505 SYF2O95926 243 aaKnown RBP10.69□□□□□ -0.7
RAB5B-206ENST00000549505 GBP1P32455 592 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 PHKA2P46019 1235 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 NAP1L1P55209 391 aaKnown RBP10.69□□□□□ -0.7
RAB5B-206ENST00000549505 NCOA4Q13772 614 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 SIX1Q15475 284 aaPredicted RBP10.69□□□□□ -0.7
RAB5B-206ENST00000549505 CCL15Q16663 113 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 ATF7IP2Q5U623 682 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 MTHFD1LQ6UB35 978 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 PLEKHH3Q7Z736 793 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 UBL4BQ8N7F7 174 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 OR5B17Q8NGF7 314 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 PTPN18Q99952 460 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 RNPEPQ9H4A4 650 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 GNEQ9Y223 722 aaKnown RBP10.69□□□□□ -0.7
RAB5B-206ENST00000549505 NUB1Q9Y5A7 615 aa10.69□□□□□ -0.7
RAB5B-206ENST00000549505 RRN3P2A6NIE6 340 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 H3BQF6 201 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 FSCN2O14926 492 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 PAEPP09466 180 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 CYP2C8P10632 490 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 ACOT2P49753 483 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 NOP14P78316 857 aaKnown RBP10.68□□□□□ -0.7
RAB5B-206ENST00000549505 TTLL12Q14166 644 aaPredicted RBP10.68□□□□□ -0.7
RAB5B-206ENST00000549505 ENOX2Q16206 610 aaKnown RBP10.68□□□□□ -0.7
RAB5B-206ENST00000549505 PPP1R15BQ5SWA1 713 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 EFCAB12Q6NXP0 572 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 IQCKQ8N0W5 287 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 NIPA2Q8N8Q9 360 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 ALG3Q92685 438 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 GLG1Q92896 1179 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 MROH7Q68CQ1 1323 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 MMP3P08254 477 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 DLATP10515 647 aaKnown RBP10.68□□□□□ -0.7
RAB5B-206ENST00000549505 YWHAEP62258 255 aaKnown RBP10.68□□□□□ -0.7
RAB5B-206ENST00000549505 LRRC38Q5VT99 294 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 LRIG3Q6UXM1 1119 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 TTC39CQ8N584 583 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 RNF149Q8NC42 400 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 ZNF564Q8TBZ8 553 aaPredicted RBP10.68□□□□□ -0.7
RAB5B-206ENST00000549505 EXOC4Q96A65 974 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 NIF3L1Q9GZT8 377 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 CDT1Q9H211 546 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 CYP3A43Q9HB55 503 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 EHD2Q9NZN4 543 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 MCM3APO60318 1980 aa10.68□□□□□ -0.7
RAB5B-206ENST00000549505 UMODL1Q5DID0 1318 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 RAD51CO43502 376 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 EIF4BP23588 611 aaKnown RBP10.67□□□□□ -0.7
RAB5B-206ENST00000549505 PTGIRP43119 386 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 ASPAP45381 313 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 SP4Q02446 784 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 TAP1Q03518 808 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 MAATS1Q7Z4T9 603 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 CASKIN2Q8WXE0 1202 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 COPS5Q92905 334 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 RNPC3Q96LT9 517 aaKnown RBP10.67□□□□□ -0.7
RAB5B-206ENST00000549505 TINF2Q9BSI4 451 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 ADAMTS10Q9H324 1103 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 PDZD7Q9H5P4 517 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 LRRC19Q9H756 370 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 PLEKHA5Q9HAU0 1116 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 PACSIN2Q9UNF0 486 aaPredicted RBP10.67□□□□□ -0.7
RAB5B-206ENST00000549505 C2CD2Q9Y426 696 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 MGAMO43451 1857 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 WEE2P0C1S8 567 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 IQCF3P0C7M6 154 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 INSRRP14616 1297 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 TNNI1P19237 187 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 MMP8P22894 467 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 CHRNA3P32297 505 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 FNTAP49354 379 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 DUPD1Q68J44 220 aa10.67□□□□□ -0.7
RAB5B-206ENST00000549505 CCDC26Q8TAB7 109 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms