RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 C12orf65Q9H3J6 166 aaKnown RBP5.12□□□□□ -1.59
PTCH1-216ENST00000548379 PPP4R1LQ9P1A2 415 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 RUVBL1Q9Y265 456 aaKnown RBP5.12□□□□□ -1.59
PTCH1-216ENST00000548379 SLC30A1Q9Y6M5 507 aa5.12□□□□□ -1.59
PTCH1-216ENST00000548379 TOP2AP11388 1531 aaKnown RBP5.12□□□□□ -1.59
PTCH1-216ENST00000548379 ZNF608Q9ULD9 1512 aaPredicted RBP5.12□□□□□ -1.59
PTCH1-216ENST00000548379 ISM1B1AKI9 464 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 MGEA5O60502 916 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 PQBP1O60828 265 aaKnown RBP5.11□□□□□ -1.59
PTCH1-216ENST00000548379 INHBBP09529 407 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 RAP2AP10114 183 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 MTHFD1P11586 935 aaKnown RBP5.11□□□□□ -1.59
PTCH1-216ENST00000548379 RPL17P18621 184 aaKnown RBP5.11□□□□□ -1.59
PTCH1-216ENST00000548379 PIK3CGP48736 1102 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 AK2P54819 239 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 CLRN1P58418 232 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 MORC3Q14149 939 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 KIF22Q14807 665 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 VPS72Q15906 364 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 ATP2B3Q16720 1220 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 TBC1D10BQ4KMP7 808 aaPredicted RBP5.11□□□□□ -1.59
PTCH1-216ENST00000548379 FKBP15Q5T1M5 1219 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 MFSD5Q6N075 450 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 DRICH1Q6PGQ1 229 aaPredicted RBP5.11□□□□□ -1.59
PTCH1-216ENST00000548379 LCNL1Q6ZST4 164 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 TOGARAM2Q6ZUX3 1019 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 TAX1BP1Q86VP1 789 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 SIAH1Q8IUQ4 282 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 SH2D3CQ8N5H7 860 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 ZSCAN18Q8TBC5 510 aaPredicted RBP5.11□□□□□ -1.59
PTCH1-216ENST00000548379 BRIX1Q8TDN6 353 aaKnown RBP5.11□□□□□ -1.59
PTCH1-216ENST00000548379 LRRC37BQ96QE4 947 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 MPHOSPH6Q99547 160 aaKnown RBP5.11□□□□□ -1.59
PTCH1-216ENST00000548379 MPHOSPH9Q99550 1183 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 ELAC2Q9BQ52 826 aaKnown RBP5.11□□□□□ -1.59
PTCH1-216ENST00000548379 C1orf43Q9BWL3 253 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 LRRC27Q9C0I9 530 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 XYLT2Q9H1B5 865 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 RSAD1Q9HA92 442 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 USP40Q9NVE5 1235 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 RLIMQ9NVW2 624 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 PLA2G3Q9NZ20 509 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 HECAQ9UBI9 543 aaPredicted RBP5.11□□□□□ -1.59
PTCH1-216ENST00000548379 STAP2Q9UGK3 403 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 ZDHHC8Q9ULC8 765 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 PCDHA1Q9Y5I3 950 aa5.11□□□□□ -1.59
PTCH1-216ENST00000548379 RIMBP3CA6NJZ7 1639 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 RIMBP3BA6NNM3 1639 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 RAD17O75943 681 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 USP19O94966 1318 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 AMHP03971 560 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 IFIT2P09913 472 aaKnown RBP5.1□□□□□ -1.59
PTCH1-216ENST00000548379 EN2P19622 333 aaPredicted RBP5.1□□□□□ -1.59
PTCH1-216ENST00000548379 SERPINB3P29508 390 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 PIK3CBP42338 1070 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 GRM7Q14831 915 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 BRD3Q15059 726 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 TCTN3Q6NUS6 607 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 SPICE1Q8N0Z3 855 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 CELF5Q8N6W0 485 aaKnown RBP5.1□□□□□ -1.59
PTCH1-216ENST00000548379 MDGA1Q8NFP4 955 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 OR52N2Q8NGI0 321 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 FEZF2Q8TBJ5 459 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 KBTBD7Q8WVZ9 684 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 ARL8AQ96BM9 186 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 GNRHR2Q96P88 292 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 APOL5Q9BWW9 433 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 TRIM54Q9BYV2 358 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 SARS2Q9NP81 518 aaKnown RBP5.1□□□□□ -1.59
PTCH1-216ENST00000548379 GNL3LQ9NVN8 582 aaKnown RBP5.1□□□□□ -1.59
PTCH1-216ENST00000548379 JKAMPQ9P055 326 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 RIMBP3Q9UFD9 1639 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 TPCN1Q9ULQ1 816 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 PCDHA6Q9UN73 950 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 MED16Q9Y2X0 877 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 SH3BP1Q9Y3L3 701 aa5.1□□□□□ -1.59
PTCH1-216ENST00000548379 TOPBP1Q92547 1522 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 CCDC88BA6NC98 1476 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 AQRO60306 1485 aaKnown RBP eCLIP5.09□□□□□ -1.59
PTCH1-216ENST00000548379 A0A1W2PPL8 197 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 TCRBV7S2A1N4TA0A589 114 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 TBX3O15119 743 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 TPD52L2O43399 206 aaKnown RBP5.09□□□□□ -1.59
PTCH1-216ENST00000548379 PLATP00750 562 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 AHSGP02765 367 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 CNR2P34972 360 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 CASP5P51878 434 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 FMO1Q01740 532 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 CREMQ03060 361 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 FOXL1Q12952 345 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 CCDC93Q567U6 631 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 ZNF529Q6P280 563 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 ZNF365Q70YC5 407 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 HTR3DQ70Z44 454 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 FAM83AQ86UY5 434 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 MORC1Q86VD1 984 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 XYLT1Q86Y38 959 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 PDSS2Q86YH6 399 aa5.09□□□□□ -1.59
PTCH1-216ENST00000548379 NLGN4YQ8NFZ3 816 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms