RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 RGMAQ96B86 450 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 MYOCQ99972 504 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 GNL3LQ9NVN8 582 aaKnown RBP5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 GOLGA6AQ9NYA3 693 aa5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 EIF2B4Q9UI10 523 aaKnown RBP5.37□□□□□ -1.55
DEPDC4-205ENST00000548313 H3BML4 177 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 FTLP02792 175 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 ZNF280AP59817 542 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 NHLH2Q02577 135 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 NOGQ13253 232 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 SNAPC2Q13487 334 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 MED25Q71SY5 747 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 GRAMD1CQ8IYS0 662 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 MYO1HQ8N1T3 1032 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 FITM2Q8N6M3 262 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 DCBLD1Q8N8Z6 715 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 DIS3LQ8TF46 1054 aaKnown RBP5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 RAB24Q969Q5 203 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 CDK5RAP3Q96JB5 506 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 FAM193BQ96PV7 902 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 VRK1Q99986 396 aaPredicted RBP5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 WDCPQ9H6R7 721 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 CEP72Q9P209 647 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 SORCS3Q9UPU3 1222 aa5.36□□□□□ -1.55
DEPDC4-205ENST00000548313 TCRBV7S2A1N4TA0A589 114 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 GAGE12BA1L429 117 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 GAGE12HA6NDE8 117 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 LEFTY2O00292 366 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 ERC2O15083 957 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 KIAA0391O15091 583 aaKnown RBP5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 GRM6O15303 877 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 PPFIA4O75335 1185 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 SLC43A1O75387 559 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 HAUS5O94927 633 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 SCAF4O95104 1147 aaKnown RBP5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 SPATA31D3P0C874 917 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 APOBEC3AP31941 199 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 MAP2K6P52564 334 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 CHN2P52757 468 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 FOXE3Q13461 319 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 ZNF267Q14586 743 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 MLC1Q15049 377 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 MIIPQ5JXC2 388 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 FAM102AQ5T9C2 384 aaPredicted RBP5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 AGAP9Q5VTM2 703 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 METRNLQ641Q3 311 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 SLC4A10Q6U841 1118 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 SPATA31D4Q6ZUB0 917 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 UBE3BQ7Z3V4 1068 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 GDF7Q7Z4P5 450 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 FMNL3Q8IVF7 1028 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 RHOT2Q8IXI1 618 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 AOPEPQ8N6M6 819 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 ZNF503Q96F45 646 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 PLEKHG4BQ96PX9 1271 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 TAAR9Q96RI9 348 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 SLC46A2Q9BY10 475 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 GSTO2Q9H4Y5 243 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 JKAMPQ9P055 326 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 NOB1Q9ULX3 412 aaKnown RBP5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 ATP11BQ9Y2G3 1177 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 HS3ST3A1Q9Y663 406 aa5.35□□□□□ -1.55
DEPDC4-205ENST00000548313 NT5C1B-RDH14C9J2C7 533 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 CTNND1O60716 968 aaKnown RBP5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 ANXA1P04083 346 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 CD1AP06126 327 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 CKBP12277 381 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 GCSHP23434 173 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 FLYWCH1Q4VC44 716 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 CCDC157Q569K6 752 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 HEATR3Q7Z4Q2 680 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 DENND1CQ8IV53 801 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 CAMKK1Q8N5S9 505 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 CPT1CQ8TCG5 803 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 NUP133Q8WUM0 1156 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 CACTINQ8WUQ7 758 aaKnown RBP5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 LRGUKQ96M69 825 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 PACSIN1Q9BY11 444 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 ANLNQ9NQW6 1124 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 C1orf112Q9NSG2 853 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 LMBRD1Q9NUN5 540 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 FBXO34Q9NWN3 711 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 CHST2Q9Y4C5 530 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 PCDHA3Q9Y5H8 950 aa5.34□□□□□ -1.55
DEPDC4-205ENST00000548313 LRRC14BA6NHZ5 514 aa5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 AHRRA9YTQ3 701 aa5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 F2RL2O00254 374 aa5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 RNASET2O00584 256 aaKnown RBP5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 PRPF3O43395 683 aaKnown RBP5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 PARNO95453 639 aaKnown RBP5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 ALDH2P05091 517 aa5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 TYRP14679 529 aa5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 RNASE9P60153 205 aaKnown RBP5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 GFOD2Q3B7J2 385 aa5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 ARMC6Q6NXE6 501 aa5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 PDSS2Q86YH6 399 aa5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 ZNF276Q8N554 614 aa5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 SLC25A43Q8WUT9 341 aaPredicted RBP5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 TSR2Q969E8 191 aaKnown RBP5.33□□□□□ -1.56
DEPDC4-205ENST00000548313 RUNDC1Q96C34 613 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms