RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 MAPK6Q16659 721 aa17.45■□□□□ 0.38
SVOP-202ENST00000548229 IQCEQ6IPM2 695 aa17.45■□□□□ 0.38
SVOP-202ENST00000548229 APBB1IPQ7Z5R6 666 aaPredicted RBP17.45■□□□□ 0.38
SVOP-202ENST00000548229 TCEAL8Q8IYN2 117 aa17.45■□□□□ 0.38
SVOP-202ENST00000548229 ZNF274Q96GC6 653 aaPredicted RBP17.45■□□□□ 0.38
SVOP-202ENST00000548229 GPR88Q9GZN0 384 aa17.45■□□□□ 0.38
SVOP-202ENST00000548229 MAFFQ9ULX9 164 aa17.45■□□□□ 0.38
SVOP-202ENST00000548229 ANKRD11Q6UB99 2663 aaPredicted RBP17.44■□□□□ 0.38
SVOP-202ENST00000548229 KCNA4P22459 653 aa17.44■□□□□ 0.38
SVOP-202ENST00000548229 PMLP29590 882 aa17.44■□□□□ 0.38
SVOP-202ENST00000548229 HOXA6P31267 233 aa17.44■□□□□ 0.38
SVOP-202ENST00000548229 DCAF4L1Q3SXM0 396 aa17.44■□□□□ 0.38
SVOP-202ENST00000548229 AASDHQ4L235 1098 aaPredicted RBP17.44■□□□□ 0.38
SVOP-202ENST00000548229 TPGS2Q68CL5 300 aa17.44■□□□□ 0.38
SVOP-202ENST00000548229 CDCA2Q69YH5 1023 aaPredicted RBP17.44■□□□□ 0.38
SVOP-202ENST00000548229 CEP68Q76N32 757 aa17.44■□□□□ 0.38
SVOP-202ENST00000548229 MFSD6LQ8IWD5 586 aa17.44■□□□□ 0.38
SVOP-202ENST00000548229 CSGALNACT1Q8TDX6 532 aa17.44■□□□□ 0.38
SVOP-202ENST00000548229 PDZD7Q9H5P4 517 aa17.44■□□□□ 0.38
SVOP-202ENST00000548229 C8orf33Q9H7E9 229 aaPredicted RBP17.44■□□□□ 0.38
SVOP-202ENST00000548229 TRPV4Q9HBA0 871 aa17.44■□□□□ 0.38
SVOP-202ENST00000548229 VWA8A3KMH1 1905 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 WDR27A2RRH5 827 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 CHURC1-FNTBB4DL54 471 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 ACKR2O00590 384 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 ZZEF1O43149 2961 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 GDF9O60383 454 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 TKTP29401 623 aaKnown RBP17.43■□□□□ 0.38
SVOP-202ENST00000548229 FNTBP49356 437 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 CLCNKBP51801 687 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 ROR1Q01973 937 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 PTGDRQ13258 359 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 UPP1Q16831 310 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 VITQ6UXI7 678 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 PIK3AP1Q6ZUJ8 805 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 NOSTRINQ8IVI9 506 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 C12orf50Q8NA57 414 aaPredicted RBP17.43■□□□□ 0.38
SVOP-202ENST00000548229 DDX27Q96GQ7 796 aaKnown RBP17.43■□□□□ 0.38
SVOP-202ENST00000548229 LOXL4Q96JB6 756 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 ZNF512Q96ME7 567 aaPredicted RBP17.43■□□□□ 0.38
SVOP-202ENST00000548229 CYP4F11Q9HBI6 524 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
SVOP-202ENST00000548229 LAMA1P25391 3075 aa17.42■□□□□ 0.38
SVOP-202ENST00000548229 H7C4K7 107 aa17.42■□□□□ 0.38
SVOP-202ENST00000548229 SYN3O14994 580 aa17.42■□□□□ 0.38
SVOP-202ENST00000548229 CDKL5O76039 1030 aa17.42■□□□□ 0.38
SVOP-202ENST00000548229 CCNE1P24864 410 aa17.42■□□□□ 0.38
SVOP-202ENST00000548229 DGKKQ5KSL6 1271 aa17.42■□□□□ 0.38
SVOP-202ENST00000548229 N4BP2L1Q5TBK1 243 aaPredicted RBP17.42■□□□□ 0.38
SVOP-202ENST00000548229 POTEHQ6S545 545 aa17.42■□□□□ 0.38
SVOP-202ENST00000548229 YAF2Q8IY57 180 aa17.42■□□□□ 0.38
SVOP-202ENST00000548229 FAM160A2Q8N612 972 aaPredicted RBP17.42■□□□□ 0.38
SVOP-202ENST00000548229 PPP1R10Q96QC0 940 aaKnown RBP17.42■□□□□ 0.38
SVOP-202ENST00000548229 GDAQ9Y2T3 454 aa17.42■□□□□ 0.38
SVOP-202ENST00000548229 USO1O60763 962 aaKnown RBP17.41■□□□□ 0.38
SVOP-202ENST00000548229 PRKCBP05771 671 aa17.41■□□□□ 0.38
SVOP-202ENST00000548229 RUFY3Q7L099 469 aa17.41■□□□□ 0.38
SVOP-202ENST00000548229 SYNPOQ8N3V7 929 aa17.41■□□□□ 0.38
SVOP-202ENST00000548229 FAM200AQ8TCP9 573 aa17.41■□□□□ 0.38
SVOP-202ENST00000548229 PIGOQ8TEQ8 1089 aa17.41■□□□□ 0.38
SVOP-202ENST00000548229 TCEAL4Q96EI5 215 aa17.41■□□□□ 0.38
SVOP-202ENST00000548229 AIFM3Q96NN9 605 aa17.41■□□□□ 0.38
SVOP-202ENST00000548229 SLC38A7Q9NVC3 462 aa17.41■□□□□ 0.38
SVOP-202ENST00000548229 INSL5Q9Y5Q6 135 aa17.41■□□□□ 0.38
SVOP-202ENST00000548229 K7ESF4 209 aa17.4■□□□□ 0.38
SVOP-202ENST00000548229 TM4SF5O14894 197 aa17.4■□□□□ 0.38
SVOP-202ENST00000548229 CHADO15335 359 aa17.4■□□□□ 0.38
SVOP-202ENST00000548229 ZNF806P0C7X5 589 aa17.4■□□□□ 0.38
SVOP-202ENST00000548229 ATP2B1P20020 1258 aa17.4■□□□□ 0.38
SVOP-202ENST00000548229 KPNA1P52294 538 aaPredicted RBP17.4■□□□□ 0.38
SVOP-202ENST00000548229 GAS6Q14393 721 aa17.4■□□□□ 0.38
SVOP-202ENST00000548229 PPP2R5AQ15172 486 aa17.4■□□□□ 0.38
SVOP-202ENST00000548229 MAEAQ7L5Y9 396 aa17.4■□□□□ 0.38
SVOP-202ENST00000548229 WDR5BQ86VZ2 330 aa17.4■□□□□ 0.38
SVOP-202ENST00000548229 ZSCAN18Q8TBC5 510 aaPredicted RBP17.4■□□□□ 0.38
SVOP-202ENST00000548229 TTC12Q9H892 705 aaPredicted RBP17.4■□□□□ 0.38
SVOP-202ENST00000548229 ASAH2Q9NR71 780 aa17.4■□□□□ 0.38
SVOP-202ENST00000548229 TOPORSQ9NS56 1045 aaPredicted RBP17.4■□□□□ 0.38
SVOP-202ENST00000548229 ARNTLO00327 626 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 PROS1P07225 676 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 VIPR2P41587 438 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 CCR2P41597 374 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 EFNA5P52803 228 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 YARSP54577 528 aaKnown RBP17.39■□□□□ 0.37
SVOP-202ENST00000548229 EPHA5P54756 1037 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 ARPP19P56211 112 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 SRSF5Q13243 272 aaKnown RBP17.39■□□□□ 0.37
SVOP-202ENST00000548229 CALCRLQ16602 461 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 HEATR6Q6AI08 1181 aaKnown RBP17.39■□□□□ 0.37
SVOP-202ENST00000548229 CD300LGQ6UXG3 332 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 RALGPS2Q86X27 583 aaPredicted RBP17.39■□□□□ 0.37
SVOP-202ENST00000548229 DEPTORQ8TB45 409 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 ZSWIM3Q96MP5 696 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 CXCL16Q9H2A7 254 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 SLITRK6Q9H5Y7 841 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 BRMS1Q9HCU9 246 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 GPRC5CQ9NQ84 441 aa17.39■□□□□ 0.37
SVOP-202ENST00000548229 SH2B1Q9NRF2 756 aaPredicted RBP17.39■□□□□ 0.37
SVOP-202ENST00000548229 CYP46A1Q9Y6A2 500 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms