RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 RABL6Q3YEC7 729 aaPredicted RBP13.46□□□□□ -0.25
PTCH1-212ENST00000546744 ITPRIPL1Q6GPH6 555 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 ZNF677Q86XU0 584 aa13.46□□□□□ -0.25
PTCH1-212ENST00000546744 F8VZ95 297 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 RASSF9O75901 435 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 THRAP10827 490 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 ALDH18A1P54886 795 aaKnown RBP13.46□□□□□ -0.26
PTCH1-212ENST00000546744 FAM47CQ5HY64 1035 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 TTC33Q6PID6 262 aaPredicted RBP13.46□□□□□ -0.26
PTCH1-212ENST00000546744 PASD1Q8IV76 773 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 TPCN2Q8NHX9 752 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 ZNF184Q99676 751 aaPredicted RBP13.46□□□□□ -0.26
PTCH1-212ENST00000546744 GGT7Q9UJ14 662 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 KDM6AO15550 1401 aaPredicted RBP13.46□□□□□ -0.26
PTCH1-212ENST00000546744 ARHGEF37A1IGU5 675 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 ARHGEF16Q5VV41 709 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 TRIM69Q86WT6 500 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 RHPN2Q8IUC4 686 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 KRT35Q92764 455 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 ZNF512BQ96KM6 892 aaPredicted RBP13.46□□□□□ -0.26
PTCH1-212ENST00000546744 PIH1D3Q9NQM4 214 aaKnown RBP13.46□□□□□ -0.26
PTCH1-212ENST00000546744 SLC9A2Q9UBY0 812 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 SERPINB13Q9UIV8 391 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 MROH7-TTC4A0A0A0MT08 1334 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 NEDD4P46934 1319 aa13.46□□□□□ -0.26
PTCH1-212ENST00000546744 CBFA2T3O75081 653 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 KITP10721 976 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 TARSP26639 723 aaKnown RBP13.45□□□□□ -0.26
PTCH1-212ENST00000546744 PTPAQ15257 358 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 NT5DC1Q5TFE4 455 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 METTL13Q8N6R0 699 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 C1orf54Q8WWF1 131 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 PSPC1Q8WXF1 523 aaKnown RBP13.45□□□□□ -0.26
PTCH1-212ENST00000546744 PICK1Q9NRD5 415 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 SCN3BQ9NY72 215 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 JCADQ9P266 1359 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 CLASP2O75122 1294 aaKnown RBP13.45□□□□□ -0.26
PTCH1-212ENST00000546744 OSBPP22059 807 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 JAK3P52333 1124 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 RUNX1T1Q06455 604 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.45□□□□□ -0.26
PTCH1-212ENST00000546744 PPIDQ08752 370 aaKnown RBP13.45□□□□□ -0.26
PTCH1-212ENST00000546744 DNAJC3Q13217 504 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 PATL1Q86TB9 770 aaKnown RBP13.45□□□□□ -0.26
PTCH1-212ENST00000546744 TRPC4APQ8TEL6 797 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 GTSE1Q9NYZ3 720 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 GTF3C4Q9UKN8 822 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 TTC7AQ9ULT0 858 aaPredicted RBP13.45□□□□□ -0.26
PTCH1-212ENST00000546744 SORCS3Q9UPU3 1222 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 TBX3O15119 743 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 BCAR1P56945 870 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 RAB15P59190 212 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 HP1BP3Q5SSJ5 553 aaPredicted RBP13.45□□□□□ -0.26
PTCH1-212ENST00000546744 TTC39BQ5VTQ0 682 aaPredicted RBP13.45□□□□□ -0.26
PTCH1-212ENST00000546744 OR6B2Q6IFH4 312 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 EP400NLQ6ZTU2 488 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 PRPF39Q86UA1 669 aaKnown RBP13.45□□□□□ -0.26
PTCH1-212ENST00000546744 SLC13A5Q86YT5 568 aaPredicted RBP13.45□□□□□ -0.26
PTCH1-212ENST00000546744 GDF3Q9NR23 364 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 TAGLN3Q9UI15 199 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 ALG6Q9Y672 507 aa13.45□□□□□ -0.26
PTCH1-212ENST00000546744 FCGR1AP12314 374 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 MCAMP43121 646 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-212ENST00000546744 EFHC1Q5JVL4 640 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 CERKQ8TCT0 537 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 WDR60Q8WVS4 1066 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 CEP95Q96GE4 821 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 CYP39A1Q9NYL5 469 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 MCM8Q9UJA3 840 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 ACTL7BQ9Y614 415 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 ZNF804BA4D1E1 1349 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 TBKBP1A7MCY6 615 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 SLCO1B7G3V0H7 640 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 ANGPT2O15123 496 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 ATP4AP20648 1035 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 ADARP55265 1226 aaKnown RBP13.44□□□□□ -0.26
PTCH1-212ENST00000546744 ITGA9Q13797 1035 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 HEATR6Q6AI08 1181 aaKnown RBP13.44□□□□□ -0.26
PTCH1-212ENST00000546744 IZUMO2Q6UXV1 221 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 ARMCX2Q7L311 632 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 EFL1Q7Z2Z2 1120 aaKnown RBP13.44□□□□□ -0.26
PTCH1-212ENST00000546744 FAM160B2Q86V87 743 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 CCNJLQ8IV13 435 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 MDM1Q8TC05 714 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 SNRNP27Q8WVK2 155 aaKnown RBP13.44□□□□□ -0.26
PTCH1-212ENST00000546744 GLG1Q92896 1179 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 RNF25Q96BH1 459 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-212ENST00000546744 PPP1R2P1Q96PQ5 205 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 PCIF1Q9H4Z3 704 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 PAK5Q9P286 719 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 HEY2Q9UBP5 337 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 NAGPAQ9UK23 515 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 CAMTA1Q9Y6Y1 1673 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 TESPA1A2RU30 521 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-212ENST00000546744 PJA2O43164 708 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 FAM58BPP0C7Q3 252 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 XIAPP98170 497 aa13.44□□□□□ -0.26
PTCH1-212ENST00000546744 PIGHQ14442 188 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-212ENST00000546744 P3H1Q32P28 736 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms