RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 PPP2R3AQ06190 1150 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 PAK2Q13177 524 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 DMP1Q13316 513 aaPredicted RBP9.21□□□□□ -0.94
VPS29-203ENST00000546588 PPP2R5AQ15172 486 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 CCL14Q16627 93 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 DGKDQ16760 1214 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 BRDTQ58F21 947 aaPredicted RBP9.21□□□□□ -0.94
VPS29-203ENST00000546588 FIGNQ5HY92 759 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 EFHC2Q5JST6 749 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 ZNF484Q5JVG2 852 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 KLHL10Q6JEL2 608 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 HAUS6Q7Z4H7 955 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 TLK2Q86UE8 772 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 VSTM4Q8IW00 320 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 TRIM59Q8IWR1 403 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 MYCT1Q8N699 235 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 TCP11Q8WWU5 503 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 BSNDQ8WZ55 320 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 IQCDQ96DY2 449 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 BORCS6Q96GS4 357 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 ABHD17AQ96GS6 310 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 FBXL18Q96ME1 805 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 TSG101Q99816 390 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.21□□□□□ -0.94
VPS29-203ENST00000546588 ARHGAP39Q9C0H5 1083 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 CCDC113Q9H0I3 377 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 IFNKQ9P0W0 207 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 SRRDQ9UH36 339 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 ZNF215Q9UL58 517 aaPredicted RBP9.21□□□□□ -0.94
VPS29-203ENST00000546588 MAPK8IP1Q9UQF2 711 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 ADGRA3Q8IWK6 1321 aa9.21□□□□□ -0.94
VPS29-203ENST00000546588 KIAA0391O15091 583 aaKnown RBP9.2□□□□□ -0.94
VPS29-203ENST00000546588 MAGEB2O15479 319 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 SEPT4O43236 478 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 CALUO43852 315 aaPredicted RBP9.2□□□□□ -0.94
VPS29-203ENST00000546588 KPNA6O60684 536 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 GCNT3O95395 438 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 EPXP11678 715 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 EDN3P14138 238 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 GLRA2P23416 452 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 TARSP26639 723 aaKnown RBP9.2□□□□□ -0.94
VPS29-203ENST00000546588 DGKGP49619 791 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 FLT3LGP49771 235 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 CPT1AP50416 773 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 COPB1P53618 953 aaKnown RBP9.2□□□□□ -0.94
VPS29-203ENST00000546588 POLGP54098 1239 aaPredicted RBP9.2□□□□□ -0.94
VPS29-203ENST00000546588 STX17P56962 302 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 UBASH3AP57075 661 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 MXD4Q14582 209 aaPredicted RBP9.2□□□□□ -0.94
VPS29-203ENST00000546588 MTERF2Q49AM1 385 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 FRMD5Q7Z6J6 570 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 NME8Q8N427 588 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 TRPV1Q8NER1 839 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 OR6J1Q8NGC5 347 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 AFG1LQ8WV93 481 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 KAT2BQ92831 832 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 BTBD6Q96KE9 485 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 CNOT6LQ96LI5 555 aaKnown RBP9.2□□□□□ -0.94
VPS29-203ENST00000546588 CCDC43Q96MW1 224 aaKnown RBP9.2□□□□□ -0.94
VPS29-203ENST00000546588 ERGIC2Q96RQ1 377 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 SRRTQ9BXP5 876 aaKnown RBP9.2□□□□□ -0.94
VPS29-203ENST00000546588 GBP3Q9H0R5 595 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 AGPAT3Q9NRZ7 376 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 ZHX1Q9UKY1 873 aaPredicted RBP9.2□□□□□ -0.94
VPS29-203ENST00000546588 FAM184BQ9ULE4 1060 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 GABRQQ9UN88 632 aa9.2□□□□□ -0.94
VPS29-203ENST00000546588 A0A1W2PP55 124 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 GOLGA6L6A8MZA4 724 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 K7ENM7 598 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 GNB5O14775 395 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 ASAP2O43150 1006 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 ADAMTS4O75173 837 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 SERPINC1P01008 464 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 NR3C1P04150 777 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 ARAFP10398 606 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 CYP2B6P20813 491 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 GARTP22102 1010 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 NR2F2P24468 414 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 RPL13P26373 211 aaKnown RBP9.19□□□□□ -0.94
VPS29-203ENST00000546588 KCNJ6P48051 423 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 DNM2P50570 870 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 PRKCZQ05513 592 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 TBC1D8BQ0IIM8 1120 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 TRIM14Q14142 442 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 KIF22Q14807 665 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 SETDB1Q15047 1291 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 LRRC41Q15345 812 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 CCDC85BQ15834 202 aaPredicted RBP9.19□□□□□ -0.94
VPS29-203ENST00000546588 MAN2A1Q16706 1144 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 FAM187BQ17R55 369 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 GJC2Q5T442 439 aaPredicted RBP9.19□□□□□ -0.94
VPS29-203ENST00000546588 CCSAPQ6IQ19 270 aaPredicted RBP9.19□□□□□ -0.94
VPS29-203ENST00000546588 SESTD1Q86VW0 696 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 NLRP8Q86W28 1048 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 ANKRD20A12PQ8NF67 263 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 GLG1Q92896 1179 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 ERO1AQ96HE7 468 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 ACCSQ96QU6 501 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 TUBGCP2Q9BSJ2 902 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 KATNAL1Q9BW62 490 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms