RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 HERC2P3Q9BVR0 1158 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 GPR62Q9BZJ7 368 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 ZBP1Q9H171 429 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 NUP62CLQ9H1M0 184 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 PDE11AQ9HCR9 933 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 MRPL17Q9NRX2 175 aaKnown RBP18.23■□□□□ 0.51
LTBR-215ENST00000546296 TRAF3IP3Q9Y228 551 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 NUB1Q9Y5A7 615 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 CDH23Q9H251 3354 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.22■□□□□ 0.51
LTBR-215ENST00000546296 C2CD2LO14523 706 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 URODP06132 367 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 NRIP1P48552 1158 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 ELAVL2Q12926 359 aaKnown RBP18.22■□□□□ 0.51
LTBR-215ENST00000546296 MYBPC2Q14324 1141 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 USP41Q3LFD5 358 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 FAM171A1Q5VUB5 890 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 CEP135Q66GS9 1140 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 CEP57Q86XR8 500 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 NT5DC4Q86YG4 428 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 SLC9A9Q8IVB4 645 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 CCDC127Q96BQ5 260 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 FNBP1Q96RU3 617 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 TSG101Q99816 390 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 DMAC2Q9NW81 257 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 DPP3Q9NY33 737 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 SSX2IPQ9Y2D8 614 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 FRMD4BQ9Y2L6 1034 aa18.22■□□□□ 0.51
LTBR-215ENST00000546296 TDRD15B5MCY1 1934 aaKnown RBP18.21■□□□□ 0.51
LTBR-215ENST00000546296 HIDE1A8MVS5 230 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 TMEM189-UBE2V1I3L0A0 370 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 PSMA7O14818 248 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 PER2O15055 1255 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 IGFBP6P24592 240 aaPredicted RBP18.21■□□□□ 0.51
LTBR-215ENST00000546296 LRPAP1P30533 357 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 PPP1R2P41236 205 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 GLUD2P49448 558 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 WNT7BP56706 349 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 CYP24A1Q07973 514 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 MORC3Q14149 939 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 COBLL1Q53SF7 1204 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 EP400NLQ6ZTU2 488 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 ADGRD2Q7Z7M1 963 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 EFCAB13Q8IY85 973 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 ADSSL1Q8N142 457 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 TMEM130Q8N3G9 435 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 GPT2Q8TD30 523 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 B3GALT6Q96L58 329 aa18.21■□□□□ 0.51
LTBR-215ENST00000546296 R3HCC1Q9Y3T6 440 aaKnown RBP18.21■□□□□ 0.51
LTBR-215ENST00000546296 C2orf71A6NGG8 1288 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 NCK2O43639 380 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 MBD3O95983 291 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 TNNC2P02585 160 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 TMEM191BP0C7N4 346 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 DLATP10515 647 aaKnown RBP18.2■□□□□ 0.5
LTBR-215ENST00000546296 NR2F2P24468 414 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 MCM4P33991 863 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 BRCC3P46736 316 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 HYAL1Q12794 435 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 ADAM9Q13443 819 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 PSMD6Q15008 389 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 PTPN14Q15678 1187 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 DUOXA2Q1HG44 320 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 KLHL10Q6JEL2 608 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 TRIML1Q8N9V2 468 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 C3orf58Q8NDZ4 430 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 TMEM174Q8WUU8 243 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 RIN2Q8WYP3 895 aaPredicted RBP18.2■□□□□ 0.5
LTBR-215ENST00000546296 DHTKD1Q96HY7 919 aaPredicted RBP18.2■□□□□ 0.5
LTBR-215ENST00000546296 ANKRD36BP1Q96IX9 119 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 TTPALQ9BTX7 342 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 EMILIN2Q9BXX0 1053 aa18.2■□□□□ 0.5
LTBR-215ENST00000546296 I3L4J1 428 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 EFEMP2O95967 443 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 TNNI1P19237 187 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 BMP6P22004 513 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 DSG1Q02413 1049 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 NFIL3Q16649 462 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 EDRF1Q3B7T1 1238 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 KIAA0319Q5VV43 1072 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 C9orf57Q5W0N0 161 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 LMBRD2Q68DH5 695 aaPredicted RBP18.19■□□□□ 0.5
LTBR-215ENST00000546296 CENPPQ6IPU0 288 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 CD300LGQ6UXG3 332 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.19■□□□□ 0.5
LTBR-215ENST00000546296 RNF168Q8IYW5 571 aaPredicted RBP18.19■□□□□ 0.5
LTBR-215ENST00000546296 MFSD14AQ96MC6 490 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 CDCA3Q99618 268 aaPredicted RBP18.19■□□□□ 0.5
LTBR-215ENST00000546296 PLXNA4Q9HCM2 1894 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 CHST7Q9NS84 486 aa18.19■□□□□ 0.5
LTBR-215ENST00000546296 PRRC2BQ5JSZ5 2229 aaKnown RBP18.19■□□□□ 0.5
LTBR-215ENST00000546296 CETN3O15182 167 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 KRT19P08727 400 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 CD44P16070 742 aaKnown RBP18.18■□□□□ 0.5
LTBR-215ENST00000546296 KLRC2P26717 231 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 GTF2F1P35269 517 aaKnown RBP eCLIP18.18■□□□□ 0.5
LTBR-215ENST00000546296 CASP4P49662 377 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 DUSP6Q16828 381 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 ZCWPW2Q504Y3 356 aa18.18■□□□□ 0.5
LTBR-215ENST00000546296 ANKRD40Q6AI12 368 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms