RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 CLDN3O15551 220 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 TRAPPC3O43617 180 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 FAM13AO94988 1023 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 PIGRP01833 764 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 POU2F2P09086 479 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 TNFSF9P41273 254 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 PTPN5P54829 565 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 NTHL1P78549 312 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 SPECC1Q5M775 1068 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 VARS2Q5ST30 1063 aaKnown RBP23.06■■□□□ 1.28
SCARB1-210ENST00000545493 ZBTB41Q5SVQ8 909 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 AXDND1Q5T1B0 1012 aaPredicted RBP23.06■■□□□ 1.28
SCARB1-210ENST00000545493 ANKS3Q6ZW76 656 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 GRASPQ7Z6J2 395 aaPredicted RBP23.06■■□□□ 1.28
SCARB1-210ENST00000545493 EPSTI1Q96J88 318 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 PRRX2Q99811 253 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 CCSER1Q9C0I3 900 aa23.06■■□□□ 1.28
SCARB1-210ENST00000545493 TSC2P49815 1807 aa23.05■■□□□ 1.28
SCARB1-210ENST00000545493 HNRNPDLO14979 420 aaKnown RBP23.05■■□□□ 1.28
SCARB1-210ENST00000545493 MARCKSP29966 332 aaPredicted RBP23.05■■□□□ 1.28
SCARB1-210ENST00000545493 ROR1Q01973 937 aa23.05■■□□□ 1.28
SCARB1-210ENST00000545493 SLC39A4Q6P5W5 647 aa23.05■■□□□ 1.28
SCARB1-210ENST00000545493 ALYREFQ86V81 257 aaKnown RBP23.05■■□□□ 1.28
SCARB1-210ENST00000545493 MYCT1Q8N699 235 aa23.05■■□□□ 1.28
SCARB1-210ENST00000545493 PHOX2BQ99453 314 aa23.05■■□□□ 1.28
SCARB1-210ENST00000545493 TBX20Q9UMR3 447 aa23.05■■□□□ 1.28
SCARB1-210ENST00000545493 ANK1P16157 1881 aa23.05■■□□□ 1.28
SCARB1-210ENST00000545493 SYN3O14994 580 aa23.04■■□□□ 1.28
SCARB1-210ENST00000545493 TBC1D4O60343 1298 aa23.04■■□□□ 1.28
SCARB1-210ENST00000545493 KRT18P05783 430 aaKnown RBP23.04■■□□□ 1.28
SCARB1-210ENST00000545493 FSHRP23945 695 aa23.04■■□□□ 1.28
SCARB1-210ENST00000545493 RPL9P32969 192 aaKnown RBP23.04■■□□□ 1.28
SCARB1-210ENST00000545493 MATR3P43243 847 aaKnown RBP eCLIP23.04■■□□□ 1.282e-7■■□□□ 13.1
SCARB1-210ENST00000545493 LIG4P49917 911 aa23.04■■□□□ 1.28
SCARB1-210ENST00000545493 SPAG1Q07617 926 aa23.04■■□□□ 1.28
SCARB1-210ENST00000545493 HTR4Q13639 388 aa23.04■■□□□ 1.28
SCARB1-210ENST00000545493 SLC8B1Q6J4K2 584 aa23.04■■□□□ 1.28
SCARB1-210ENST00000545493 MAP4K3Q8IVH8 894 aa23.04■■□□□ 1.28
SCARB1-210ENST00000545493 INTS4Q96HW7 963 aaKnown RBP23.04■■□□□ 1.28
SCARB1-210ENST00000545493 MTMR6Q9Y217 621 aa23.04■■□□□ 1.28
SCARB1-210ENST00000545493 VPS13AQ96RL7 3174 aa23.03■■□□□ 1.28
SCARB1-210ENST00000545493 TTC26A0AVF1 554 aa23.03■■□□□ 1.28
SCARB1-210ENST00000545493 WDR27A2RRH5 827 aa23.03■■□□□ 1.28
SCARB1-210ENST00000545493 TRAK2O60296 914 aa23.03■■□□□ 1.28
SCARB1-210ENST00000545493 TBCAO75347 108 aaKnown RBP23.03■■□□□ 1.28
SCARB1-210ENST00000545493 CLTAP09496 248 aa23.03■■□□□ 1.28
SCARB1-210ENST00000545493 LAMP2P13473 410 aa23.03■■□□□ 1.28
SCARB1-210ENST00000545493 NMT1P30419 496 aaKnown RBP23.03■■□□□ 1.28
SCARB1-210ENST00000545493 ST13P5Q8NFI4 369 aaPredicted RBP23.03■■□□□ 1.28
SCARB1-210ENST00000545493 SUSD3Q96L08 255 aa23.03■■□□□ 1.28
SCARB1-210ENST00000545493 CLIC6Q96NY7 704 aa23.03■■□□□ 1.28
SCARB1-210ENST00000545493 FOXD4L1Q9NU39 408 aa23.03■■□□□ 1.28
SCARB1-210ENST00000545493 HCFC1R1Q9NWW0 138 aa23.03■■□□□ 1.28
SCARB1-210ENST00000545493 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.03■■□□□ 1.281e-7■■□□□ 13.4
SCARB1-210ENST00000545493 NUB1Q9Y5A7 615 aa23.03■■□□□ 1.28
SCARB1-210ENST00000545493 ANHXE9PGG2 379 aa23.02■■□□□ 1.28
SCARB1-210ENST00000545493 XYLBO75191 536 aa23.02■■□□□ 1.28
SCARB1-210ENST00000545493 NPR3P17342 541 aa23.02■■□□□ 1.28
SCARB1-210ENST00000545493 MCM4P33991 863 aa23.02■■□□□ 1.28
SCARB1-210ENST00000545493 MRE11P49959 708 aa23.02■■□□□ 1.28
SCARB1-210ENST00000545493 MRPL58Q14197 206 aaKnown RBP23.02■■□□□ 1.28
SCARB1-210ENST00000545493 ENOX2Q16206 610 aaKnown RBP23.02■■□□□ 1.28
SCARB1-210ENST00000545493 ASTLQ6HA08 431 aaPredicted RBP23.02■■□□□ 1.28
SCARB1-210ENST00000545493 MFSD1Q9H3U5 465 aa23.02■■□□□ 1.28
SCARB1-210ENST00000545493 ZHX3Q9H4I2 956 aa23.02■■□□□ 1.28
SCARB1-210ENST00000545493 PLEKHA5Q9HAU0 1116 aa23.02■■□□□ 1.28
SCARB1-210ENST00000545493 POLIQ9UNA4 740 aa23.02■■□□□ 1.28
SCARB1-210ENST00000545493 SRPRBQ9Y5M8 271 aaKnown RBP23.02■■□□□ 1.28
SCARB1-210ENST00000545493 NUMBLQ9Y6R0 609 aa23.02■■□□□ 1.28
SCARB1-210ENST00000545493 CACNA1HO95180 2353 aa23.02■■□□□ 1.28
SCARB1-210ENST00000545493 K7ELQ4 463 aaPredicted RBP23.01■■□□□ 1.27
SCARB1-210ENST00000545493 SCP2P22307 547 aa23.01■■□□□ 1.27
SCARB1-210ENST00000545493 LRPAP1P30533 357 aa23.01■■□□□ 1.27
SCARB1-210ENST00000545493 GTF2BQ00403 316 aa23.01■■□□□ 1.27
SCARB1-210ENST00000545493 PPP2R3AQ06190 1150 aa23.01■■□□□ 1.27
SCARB1-210ENST00000545493 UVSSAQ2YD98 709 aa23.01■■□□□ 1.27
SCARB1-210ENST00000545493 SLC44A3Q8N4M1 653 aa23.01■■□□□ 1.27
SCARB1-210ENST00000545493 ITFG1Q8TB96 612 aa23.01■■□□□ 1.27
SCARB1-210ENST00000545493 KIF12Q96FN5 646 aa23.01■■□□□ 1.27
SCARB1-210ENST00000545493 USP28Q96RU2 1077 aa23.01■■□□□ 1.27
SCARB1-210ENST00000545493 FBXL5Q9UKA1 691 aa23.01■■□□□ 1.27
SCARB1-210ENST00000545493 CDH7Q9ULB5 785 aa23.01■■□□□ 1.27
SCARB1-210ENST00000545493 TISP43B9A030 160 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 OGTO15294 1046 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 GALR2O43603 387 aaPredicted RBP23■■□□□ 1.27
SCARB1-210ENST00000545493 CFHP08603 1231 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 DDIT3P35638 169 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 GUCY2FP51841 1108 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 CEBPZQ03701 1054 aaKnown RBP23■■□□□ 1.27
SCARB1-210ENST00000545493 ZBTB6Q15916 424 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 ZNF280DQ6N043 979 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 SIX5Q8N196 739 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 FLCNQ8NFG4 579 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 DDX12PQ92771 950 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 FGF14Q92915 247 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 NXPE3Q969Y0 559 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 MSTO1Q9BUK6 570 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 FAM86C1Q9NVL1 165 aa23■■□□□ 1.27
SCARB1-210ENST00000545493 DNMT3BQ9UBC3 853 aaKnown RBP23■■□□□ 1.27
SCARB1-210ENST00000545493 STK17AQ9UEE5 414 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms