RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 AP3M2P53677 418 aa14.16□□□□□ -0.14
DDX11-227ENST00000544652 SOX4Q06945 474 aaPredicted RBP14.16□□□□□ -0.14
DDX11-227ENST00000544652 TUSC3Q13454 348 aa14.16□□□□□ -0.14
DDX11-227ENST00000544652 KCNJ12Q14500 433 aa14.16□□□□□ -0.14
DDX11-227ENST00000544652 FAM109BQ6ICB4 259 aaPredicted RBP14.16□□□□□ -0.14
DDX11-227ENST00000544652 GAS2L3Q86XJ1 694 aa14.16□□□□□ -0.14
DDX11-227ENST00000544652 ZNF280BQ86YH2 543 aa14.16□□□□□ -0.14
DDX11-227ENST00000544652 COLGALT2Q8IYK4 626 aa14.16□□□□□ -0.14
DDX11-227ENST00000544652 OR5B17Q8NGF7 314 aa14.16□□□□□ -0.14
DDX11-227ENST00000544652 CXorf38Q8TB03 319 aa14.16□□□□□ -0.14
DDX11-227ENST00000544652 CACTINQ8WUQ7 758 aaKnown RBP14.16□□□□□ -0.14
DDX11-227ENST00000544652 YME1L1Q96TA2 773 aa14.16□□□□□ -0.14
DDX11-227ENST00000544652 POP1Q99575 1024 aaKnown RBP14.16□□□□□ -0.14
DDX11-227ENST00000544652 ZBED2Q9BTP6 218 aa14.16□□□□□ -0.14
DDX11-227ENST00000544652 NRDE2Q9H7Z3 1164 aa14.16□□□□□ -0.14
DDX11-227ENST00000544652 PCDHA11Q9Y5I1 949 aa14.16□□□□□ -0.14
DDX11-227ENST00000544652 CEP290O15078 2479 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 GRXCR1A8MXD5 290 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 PMM2O15305 246 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 TLL1O43897 1013 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 B4GALT3O60512 393 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 TRIM49P0CI25 452 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 TRIM49CP0CI26 452 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 DLATP10515 647 aaKnown RBP14.15□□□□□ -0.14
DDX11-227ENST00000544652 TNNI1P19237 187 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 GTF2H1P32780 548 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 PPP3CAQ08209 521 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 BTG3Q14201 252 aaPredicted RBP14.15□□□□□ -0.14
DDX11-227ENST00000544652 MAN2A1Q16706 1144 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 DUOXA2Q1HG44 320 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 ZACNQ401N2 412 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 PAN2Q504Q3 1202 aaKnown RBP14.15□□□□□ -0.14
DDX11-227ENST00000544652 PRPF38BQ5VTL8 546 aaKnown RBP14.15□□□□□ -0.14
DDX11-227ENST00000544652 APTXQ7Z2E3 356 aaKnown RBP14.15□□□□□ -0.14
DDX11-227ENST00000544652 C18orf25Q96B23 403 aaPredicted RBP14.15□□□□□ -0.14
DDX11-227ENST00000544652 TMEM175Q9BSA9 504 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 MAGEC2Q9UBF1 373 aaPredicted RBP14.15□□□□□ -0.14
DDX11-227ENST00000544652 TUBGCP4Q9UGJ1 667 aa14.15□□□□□ -0.14
DDX11-227ENST00000544652 LIMA1Q9UHB6 759 aaKnown RBP14.15□□□□□ -0.14
DDX11-227ENST00000544652 ANO9A1A5B4 782 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 STX10O60499 249 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 TMEM191BP0C7N4 346 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 RABGGTBP53611 331 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 TFAMQ00059 246 aaKnown RBP14.14□□□□□ -0.15
DDX11-227ENST00000544652 RNASELQ05823 741 aaKnown RBP14.14□□□□□ -0.15
DDX11-227ENST00000544652 KCNH2Q12809 1159 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 HSP90AA4PQ58FG1 418 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 DCAF17Q5H9S7 520 aaPredicted RBP14.14□□□□□ -0.15
DDX11-227ENST00000544652 MIIPQ5JXC2 388 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 LMBRD2Q68DH5 695 aaPredicted RBP14.14□□□□□ -0.15
DDX11-227ENST00000544652 SV2AQ7L0J3 742 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 TRAPPC11Q7Z392 1133 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 C1orf127Q8N9H9 656 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 BEST2Q8NFU1 509 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 CLP1Q92989 425 aaKnown RBP14.14□□□□□ -0.15
DDX11-227ENST00000544652 ANKRD36BP1Q96IX9 119 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 UROC1Q96N76 676 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 TUBGCP2Q9BSJ2 902 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 MTMR12Q9C0I1 747 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 TMEM8AQ9HCN3 771 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 DPP3Q9NY33 737 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 HCSTQ9UBK5 93 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 DNAJB4Q9UDY4 337 aa14.14□□□□□ -0.15
DDX11-227ENST00000544652 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.14□□□□□ -0.15
DDX11-227ENST00000544652 MRPL42Q9Y6G3 142 aaKnown RBP14.14□□□□□ -0.15
DDX11-227ENST00000544652 MTCL1Q9Y4B5 1905 aaKnown RBP14.13□□□□□ -0.15
DDX11-227ENST00000544652 LCHNA4D1U4 455 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 CARNS1A5YM72 827 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 GOLGA6L19H0YKK7 550 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 TMEM189-UBE2V1I3L0A0 370 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 PIRO00625 290 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 TNNC2P02585 160 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 ATP1A3P13637 1013 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 RPL9P32969 192 aaKnown RBP14.13□□□□□ -0.15
DDX11-227ENST00000544652 MTIF2P46199 727 aaKnown RBP14.13□□□□□ -0.15
DDX11-227ENST00000544652 FMO5P49326 533 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 KRT31Q15323 416 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 UPP1Q16831 310 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 LRIT3Q3SXY7 679 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 TCERG1LQ5VWI1 586 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 TDRD10Q5VZ19 366 aaKnown RBP14.13□□□□□ -0.15
DDX11-227ENST00000544652 KRT39Q6A163 491 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 FIBCD1Q8N539 461 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 FAM84AQ96KN4 292 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 FAM193BQ96PV7 902 aaPredicted RBP14.13□□□□□ -0.15
DDX11-227ENST00000544652 PBX4Q9BYU1 374 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 RBSNQ9H1K0 784 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 GOLGA2P5Q9HBQ8 144 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 SIX4Q9UIU6 781 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 ITGA11Q9UKX5 1188 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 COLQQ9Y215 455 aaPredicted RBP14.13□□□□□ -0.15
DDX11-227ENST00000544652 COQ4Q9Y3A0 265 aa14.13□□□□□ -0.15
DDX11-227ENST00000544652 LINC01553A4QN01 128 aa14.12□□□□□ -0.15
DDX11-227ENST00000544652 P4HA2O15460 535 aa14.12□□□□□ -0.15
DDX11-227ENST00000544652 N4BP1O75113 896 aaKnown RBP14.12□□□□□ -0.15
DDX11-227ENST00000544652 CST3P01034 146 aaPredicted RBP14.12□□□□□ -0.15
DDX11-227ENST00000544652 AFPP02771 609 aaKnown RBP14.12□□□□□ -0.15
DDX11-227ENST00000544652 ITGB3P05106 788 aa14.12□□□□□ -0.15
DDX11-227ENST00000544652 GALTP07902 379 aa14.12□□□□□ -0.15
DDX11-227ENST00000544652 MYOGP15173 224 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms