RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 METTL14Q9HCE5 456 aaKnown RBP15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ARMCX3Q9UH62 379 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF1A-216ENST00000543995 LRRIQ3A6PVS8 624 aaPredicted RBP15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 PPM1AP35813 382 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CLCNKBP51801 687 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ERVK-21P61565 698 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 DLG4P78352 724 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 DUOXA2Q1HG44 320 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 DCAF17Q5H9S7 520 aaPredicted RBP15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TCERG1LQ5VWI1 586 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 FRMD5Q7Z6J6 570 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 FBXO22Q8NEZ5 403 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ENOX1Q8TC92 643 aaKnown RBP15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 PLEKHO2Q8TD55 490 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TMC2Q8TDI7 906 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ARNTL2Q8WYA1 636 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 DDX27Q96GQ7 796 aaKnown RBP15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 COLEC11Q9BWP8 271 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 PLVAPQ9BX97 442 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ZNF576Q9H609 170 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 INTS13Q9NVM9 706 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 SPG21Q9NZD8 308 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 NFE2L3Q9Y4A8 694 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 PTPRJQ12913 1337 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TRIOBPQ9H2D6 2365 aa15.66■□□□□ 0.1
TNFRSF1A-216ENST00000543995 PODXLO00592 558 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 B3GAT3O94766 335 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TRIM49P0CI25 452 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TRIM49CP0CI26 452 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 RPL9P32969 192 aaKnown RBP15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ZNF165P49910 485 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 UPP1Q16831 310 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 HSP90AA4PQ58FG1 418 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 ZNF697Q5TEC3 545 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 FAM114A1Q8IWE2 563 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TMEM130Q8N3G9 435 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 KLHL23Q8NBE8 558 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 OR5B17Q8NGF7 314 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 HASPINQ8TF76 798 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TMEM169Q96HH4 297 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 FAM84AQ96KN4 292 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 CNOT6LQ96LI5 555 aaKnown RBP15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 THAP9Q9H5L6 903 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 MMRN2Q9H8L6 949 aa15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 MAGEC2Q9UBF1 373 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 R3HCC1Q9Y3T6 440 aaKnown RBP15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 LAMA2P24043 3122 aaKnown RBP15.65■□□□□ 0.1
TNFRSF1A-216ENST00000543995 TMEM265A0A087WTH1 108 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 C5orf67F2Z3F1 127 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TADA2AO75478 443 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ITGB3P05106 788 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 RB1P06400 928 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 KRT19P08727 400 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 LRPAP1P30533 357 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 AP3M2P53677 418 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 MYL5Q02045 173 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 KRT17Q04695 432 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 BIRC3Q13489 604 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 C9orf57Q5W0N0 161 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 DCLRE1AQ6PJP8 1040 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TMEM173Q86WV6 379 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 SLC39A11Q8N1S5 342 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 AOPEPQ8N6M6 819 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 BORCS6Q96GS4 357 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 C11orf84Q9BUA3 381 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ITGA11Q9UKX5 1188 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 PLXNA4Q9HCM2 1894 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 LAMA3Q16787 3333 aa15.64■□□□□ 0.09
TNFRSF1A-216ENST00000543995 SMTNL1A8MU46 457 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 F8W810 466 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 IKBKBO14920 756 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 STX10O60499 249 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 PHACTR2O75167 634 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 FGF18O76093 207 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 KIF4AO95239 1232 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 POLR2BP30876 1174 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ENPEPQ07075 957 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 GPM6BQ13491 265 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 LRSAM1Q6UWE0 723 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 C1orf127Q8N9H9 656 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ZNF516Q92618 1163 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 IGSF21Q96ID5 467 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 BPIFA3Q9BQP9 254 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 SAMSN1Q9NSI8 373 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 MARCH5Q9NX47 278 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ADAM28Q9UKQ2 775 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 NUB1Q9Y5A7 615 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 BECN2A8MW95 431 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CLSTN1O94985 981 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 MTIF2P46199 727 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 GCLMP48507 274 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 MARSP56192 900 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 CLDN10P78369 228 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TRAPPC11Q7Z392 1133 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TSPY26PQ9H489 355 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 ALG13Q9NP73 1137 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 FANCLQ9NW38 375 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 AGAP1Q9UPQ3 857 aa15.63■□□□□ 0.09
TNFRSF1A-216ENST00000543995 H3BNC9 293 aa15.62■□□□□ 0.09
TNFRSF1A-216ENST00000543995 TMEM189-UBE2V1I3L0A0 370 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms