RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SNRPFP62306 86 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 TMED2Q15363 201 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 PAN2Q504Q3 1202 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 GAS2L3Q86XJ1 694 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 EFHBQ8N7U6 833 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 RABGGTAQ92696 567 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 P2RX7Q99572 595 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 VCX3BQ9H321 246 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 UNC45AQ9H3U1 944 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 LRRC4BQ9NT99 713 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 CHEK2O96017 543 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 ADORA2AP29274 412 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 MCCD1P59942 119 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 PRAMEP78395 509 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 GFPT1Q06210 699 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 AP1B1Q10567 949 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 TMEM132BQ14DG7 1078 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 ZC2HC1CQ53FD0 456 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 FRA10AC1Q70Z53 315 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 DEFB128Q7Z7B8 93 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 CATSPER3Q86XQ3 398 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 CDC26Q8NHZ8 85 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 SCG3Q8WXD2 468 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 NUDT16L1Q9BRJ7 211 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 MTG1Q9BT17 334 aaPredicted RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 TMEM60Q9H2L4 133 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 PXMP2Q9NR77 195 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 FAM49BQ9NUQ9 324 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 DDX56Q9NY93 547 aaKnown RBP7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 BFARQ9NZS9 450 aa7.29□□□□□ -1.24
SRGAP1-206ENST00000543397 ARHGAP42A6NI28 874 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 PODXLO00592 558 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 PALMO75781 387 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 URODP06132 367 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 ODC1P11926 461 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 SHMT1P34896 483 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 SREBF1P36956 1147 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 SULT1E1P49888 294 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 ARL4CP56559 192 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 NOP14P78316 857 aaKnown RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 EDRF1Q3B7T1 1238 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 MAP3K21Q5TCX8 1036 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 MOXD1Q6UVY6 613 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 CDKL3Q8IVW4 592 aaPredicted RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 SYTL5Q8TDW5 730 aaPredicted RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 WHAMMQ8TF30 809 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 FMO2Q99518 471 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 EDEM3Q9BZQ6 932 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 ENTPD7Q9NQZ7 604 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 APEX2Q9UBZ4 518 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 PYCARDQ9ULZ3 195 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 EIF3DO15371 548 aaKnown RBP eCLIP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 EXTL3O43909 919 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 VIL1P09327 827 aaKnown RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 MYBP10242 640 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 PDGFRAP16234 1089 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 OAS2P29728 719 aaKnown RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 CYP2C19P33261 490 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 ATP1A2P50993 1020 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 VGLL4Q14135 290 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 CYP4A22Q5TCH4 519 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 RBBP8NLQ8NC74 664 aaPredicted RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 DAGLBQ8NCG7 672 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 EXT2Q93063 718 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 PPP1R12CQ9BZL4 782 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 TMEM39AQ9NV64 488 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 KLK14Q9P0G3 267 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 KLF15Q9UIH9 416 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 STMND1H3BQB6 276 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 DFFAO00273 331 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 VWA5AO00534 786 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 ZC3H11AO75152 810 aaKnown RBP eCLIP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 KRT37O76014 449 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 HLA-DRAP01903 254 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 SSTR3P32745 418 aaPredicted RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 FMO5P49326 533 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 OAZ1P54368 228 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 ERVK-9P63128 1117 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 ERVK-24P63145 666 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 PPIL2Q13356 520 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 ZNF211Q13398 564 aaPredicted RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 SH2D4BQ5SQS7 431 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 PCNX4Q63HM2 1172 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 APOBEC3HQ6NTF7 200 aaKnown RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 RGMBQ6NW40 437 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 HPDLQ96IR7 371 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 VTA1Q9NP79 307 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 ABI2Q9NYB9 513 aaPredicted RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 FIS1Q9Y3D6 152 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 PIK3R2O00459 728 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 NVLO15381 856 aaKnown RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 ZNF189O75820 626 aaPredicted RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 RHOBTB3O94955 611 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 C2orf54Q08AI8 447 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 GLRA4Q5JXX5 417 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 BPIFA3Q9BQP9 254 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 NIF3L1Q9GZT8 377 aa7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 INTS9Q9NV88 658 aaKnown RBP7.28□□□□□ -1.24
SRGAP1-206ENST00000543397 NAGPAQ9UK23 515 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms