RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.73□□□□□ -1.33
XRCC4-206ENST00000542685 ANKRD36BQ8N2N9 1353 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 PLEKHG2Q9H7P9 1386 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 CCDC189A1A4V9 331 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 PLEKHD1A6NEE1 506 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 OVOL3O00110 214 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 MYO1CO00159 1063 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 NRP1O14786 923 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 PLIN1O60240 522 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 IPO7O95373 1038 aaKnown RBP6.72□□□□□ -1.33
XRCC4-206ENST00000542685 PEX11BO96011 259 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 CASRP41180 1078 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 MAGEA9P43362 315 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 LSSP48449 732 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 C20orf194Q5TEA3 1177 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 ZNF627Q7L945 461 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 ANKRD23Q86SG2 305 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 ANKRD20A12PQ8NF67 263 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 LEO1Q8WVC0 666 aaPredicted RBP6.72□□□□□ -1.33
XRCC4-206ENST00000542685 PPM1EQ8WY54 764 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 FDXACB1Q9BRP7 624 aaPredicted RBP6.72□□□□□ -1.33
XRCC4-206ENST00000542685 FAM107BQ9H098 131 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 GPRC5BQ9NZH0 403 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.72□□□□□ -1.33
XRCC4-206ENST00000542685 USP25Q9UHP3 1055 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 CFAP74Q9C0B2 1584 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 ERVK-7P63135 1459 aa6.72□□□□□ -1.33
XRCC4-206ENST00000542685 ARHGAP5Q13017 1502 aa6.71□□□□□ -1.33
XRCC4-206ENST00000542685 ZFYVE16Q7Z3T8 1539 aa6.71□□□□□ -1.33
XRCC4-206ENST00000542685 HOXA3O43365 443 aaPredicted RBP6.71□□□□□ -1.34
XRCC4-206ENST00000542685 RAB11FIP3O75154 756 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 CFBP00751 764 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 INHBCP55103 352 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 PPARAQ07869 468 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 RABL3Q5HYI8 236 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 BROXQ5VW32 411 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 LMBR1LQ6UX01 489 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 APBB1IPQ7Z5R6 666 aaPredicted RBP6.71□□□□□ -1.34
XRCC4-206ENST00000542685 KIAA0907Q7Z7F0 614 aaPredicted RBP6.71□□□□□ -1.34
XRCC4-206ENST00000542685 CXorf67Q86X51 503 aaPredicted RBP6.71□□□□□ -1.34
XRCC4-206ENST00000542685 GOLGA5Q8TBA6 731 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 CPPED1Q9BRF8 314 aaPredicted RBP6.71□□□□□ -1.34
XRCC4-206ENST00000542685 TEX13AQ9BXU3 409 aaPredicted RBP6.71□□□□□ -1.34
XRCC4-206ENST00000542685 C22orf23Q9BZE7 217 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 EMC7Q9NPA0 242 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 PPP2R3BQ9Y5P8 575 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 FANCAO15360 1455 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 LMTK2Q8IWU2 1503 aa6.71□□□□□ -1.34
XRCC4-206ENST00000542685 NSD2O96028 1365 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 A0A087X1B8 175 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 H0YHG0 523 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 KIF2AO00139 706 aaPredicted RBP6.7□□□□□ -1.34
XRCC4-206ENST00000542685 KDM1AO60341 852 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 NRP2O60462 931 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 SEC24DO94855 1032 aaPredicted RBP6.7□□□□□ -1.34
XRCC4-206ENST00000542685 CLEC2LP0C7M8 214 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 MAP2K2P36507 400 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 MGAT5Q09328 741 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 DDB1Q16531 1140 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 JAKMIP3Q5VZ66 844 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 TSHZ1Q6ZSZ6 1077 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 FRMD7Q6ZUT3 714 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 SRLQ86TD4 932 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 LDLRAD3Q86YD5 345 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 ZNF276Q8N554 614 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 SLC25A43Q8WUT9 341 aaPredicted RBP6.7□□□□□ -1.34
XRCC4-206ENST00000542685 UTP14AQ9BVJ6 771 aaKnown RBP6.7□□□□□ -1.34
XRCC4-206ENST00000542685 ENKD1Q9H0I2 346 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 PRDM16Q9HAZ2 1276 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 A1CFQ9NQ94 594 aaKnown RBP6.7□□□□□ -1.34
XRCC4-206ENST00000542685 C11orf21Q9P2W6 132 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 POLKQ9UBT6 870 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 NUMBLQ9Y6R0 609 aa6.7□□□□□ -1.34
XRCC4-206ENST00000542685 MROH1Q8NDA8 1641 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 QRICH2Q9H0J4 1663 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 ANKRD18BA2A2Z9 1011 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 GSG1L2A8MUP6 293 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 TMCO5BA8MYB1 307 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 MPHOSPH10O00566 681 aaKnown RBP6.69□□□□□ -1.34
XRCC4-206ENST00000542685 PDE8AO60658 829 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 BAG4O95429 457 aaKnown RBP6.69□□□□□ -1.34
XRCC4-206ENST00000542685 SETSIPP0DME0 302 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 MYCLP1P12525 358 aaPredicted RBP6.69□□□□□ -1.34
XRCC4-206ENST00000542685 GPR15P49685 360 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 MANFP55145 182 aaKnown RBP6.69□□□□□ -1.34
XRCC4-206ENST00000542685 NRG3P56975 720 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 ZRSR1Q15695 479 aaKnown RBP6.69□□□□□ -1.34
XRCC4-206ENST00000542685 CCDC62Q6P9F0 684 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 MMS22LQ6ZRQ5 1243 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 HTR3DQ70Z44 454 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 TAS1R1Q7RTX1 841 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 FMNL3Q8IVF7 1028 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 MSL3Q8N5Y2 521 aaKnown RBP6.69□□□□□ -1.34
XRCC4-206ENST00000542685 SLC5A5Q92911 643 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 CHMP4CQ96CF2 233 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 TRPS1Q9UHF7 1281 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 TMPRSS11EQ9UL52 423 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 SORCS3Q9UPU3 1222 aa6.69□□□□□ -1.34
XRCC4-206ENST00000542685 NOC2LQ9Y3T9 749 aaKnown RBP6.69□□□□□ -1.34
XRCC4-206ENST00000542685 ADGRB3O60242 1522 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms