RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 YARSP54577 528 aaKnown RBP17.11■□□□□ 0.33
USP5-207ENST00000542371 NOP14P78316 857 aaKnown RBP17.11■□□□□ 0.33
USP5-207ENST00000542371 HTRA3P83110 453 aa17.11■□□□□ 0.33
USP5-207ENST00000542371 PTK7Q13308 1070 aa17.11■□□□□ 0.33
USP5-207ENST00000542371 LHX8Q68G74 356 aa17.11■□□□□ 0.33
USP5-207ENST00000542371 ZNF677Q86XU0 584 aa17.11■□□□□ 0.33
USP5-207ENST00000542371 SLC35F6Q8N357 371 aa17.11■□□□□ 0.33
USP5-207ENST00000542371 ARRDC4Q8NCT1 418 aa17.11■□□□□ 0.33
USP5-207ENST00000542371 LNX1Q8TBB1 728 aaPredicted RBP17.11■□□□□ 0.33
USP5-207ENST00000542371 WDR24Q96S15 920 aa17.11■□□□□ 0.33
USP5-207ENST00000542371 IRX2Q9BZI1 471 aaPredicted RBP17.11■□□□□ 0.33
USP5-207ENST00000542371 L2HGDHQ9H9P8 463 aa17.11■□□□□ 0.33
USP5-207ENST00000542371 APOBEC3GQ9HC16 384 aaKnown RBP17.11■□□□□ 0.33
USP5-207ENST00000542371 CDY2AQ9Y6F7 541 aa17.11■□□□□ 0.33
USP5-207ENST00000542371 GRIN2DO15399 1336 aa17.11■□□□□ 0.33
USP5-207ENST00000542371 RALGAPA2Q2PPJ7 1873 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 CTAGE9A4FU28 777 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 CAND2O75155 1236 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 TACC1O75410 805 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 H2AFZP0C0S5 128 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 USP8P40818 1118 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 YWHAEP62258 255 aaKnown RBP17.1■□□□□ 0.33
USP5-207ENST00000542371 MGAT3Q09327 533 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 ITGA7Q13683 1181 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 TMEM132DQ14C87 1099 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 JADE1Q6IE81 842 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 H2AFVQ71UI9 128 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 TRIM58Q8NG06 486 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 OLIG1Q8TAK6 271 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 EPS8L1Q8TE68 723 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 TMEM40Q8WWA1 233 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 GLT1D1Q96MS3 346 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 NAPGQ99747 312 aaPredicted RBP17.1■□□□□ 0.33
USP5-207ENST00000542371 BEGAINQ9BUH8 593 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 TRIM6Q9C030 488 aaPredicted RBP17.1■□□□□ 0.33
USP5-207ENST00000542371 NIF3L1Q9GZT8 377 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 FAM124BQ9H5Z6 455 aaPredicted RBP17.1■□□□□ 0.33
USP5-207ENST00000542371 VRTNQ9H8Y1 702 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 CHST12Q9NRB3 414 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 TRIM10Q9UDY6 481 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 NOCTQ9UK39 431 aaKnown RBP17.1■□□□□ 0.33
USP5-207ENST00000542371 ITGA11Q9UKX5 1188 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 PIN4Q9Y237 131 aaKnown RBP17.1■□□□□ 0.33
USP5-207ENST00000542371 NUB1Q9Y5A7 615 aa17.1■□□□□ 0.33
USP5-207ENST00000542371 A0A0A6YYK5 440 aaPredicted RBP17.09■□□□□ 0.33
USP5-207ENST00000542371 MEFVO15553 781 aaPredicted RBP17.09■□□□□ 0.33
USP5-207ENST00000542371 CYP26A1O43174 497 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 SGPL1O95470 568 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 STAU1O95793 577 aaKnown RBP17.09■□□□□ 0.33
USP5-207ENST00000542371 NFICP08651 508 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 GZMAP12544 262 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 CYP11B1P15538 503 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 ACO1P21399 889 aaKnown RBP17.09■□□□□ 0.33
USP5-207ENST00000542371 PDE6CP51160 858 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 MYL6P60660 151 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 PTGISQ16647 500 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 IFI16Q16666 785 aaKnown RBP17.09■□□□□ 0.33
USP5-207ENST00000542371 FAM228AQ86W67 206 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 GLYCTKQ8IVS8 523 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 UBR7Q8N806 425 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 MYRIPQ8NFW9 859 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 U2AF1L4Q8WU68 220 aaKnown RBP17.09■□□□□ 0.33
USP5-207ENST00000542371 FAM84AQ96KN4 292 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 CALR3Q96L12 384 aaKnown RBP17.09■□□□□ 0.33
USP5-207ENST00000542371 SENP6Q9GZR1 1112 aaPredicted RBP17.09■□□□□ 0.33
USP5-207ENST00000542371 TRIM17Q9Y577 477 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 PCDHB2Q9Y5E7 798 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 SQORQ9Y6N5 450 aa17.09■□□□□ 0.33
USP5-207ENST00000542371 ANO9A1A5B4 782 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 RIOK3O14730 519 aaKnown RBP17.08■□□□□ 0.32
USP5-207ENST00000542371 RPS6KA5O75582 802 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
USP5-207ENST00000542371 KRT5P13647 590 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 CDR2Q01850 454 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 ZNF699Q32M78 642 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 FAM26DQ5JW98 314 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 UBXN11Q5T124 520 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 SPOPLQ6IQ16 392 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 NOP9Q86U38 636 aaKnown RBP17.08■□□□□ 0.32
USP5-207ENST00000542371 RPUSD2Q8IZ73 545 aaKnown RBP17.08■□□□□ 0.32
USP5-207ENST00000542371 C1orf127Q8N9H9 656 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 SLC43A3Q8NBI5 491 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 SNX27Q96L92 541 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 NOX5Q96PH1 765 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 ALS2CR12Q96Q35 445 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 EIF2AQ9BY44 585 aaKnown RBP17.08■□□□□ 0.32
USP5-207ENST00000542371 XYLT2Q9H1B5 865 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.08■□□□□ 0.32
USP5-207ENST00000542371 SNTG2Q9NY99 539 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 TFR2Q9UP52 801 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 NOC2LQ9Y3T9 749 aaKnown RBP17.08■□□□□ 0.32
USP5-207ENST00000542371 PTCH2Q9Y6C5 1203 aa17.08■□□□□ 0.32
USP5-207ENST00000542371 GPR182O15218 404 aa17.07■□□□□ 0.32
USP5-207ENST00000542371 FANCGO15287 622 aa17.07■□□□□ 0.32
USP5-207ENST00000542371 XPOTO43592 962 aaKnown RBP17.07■□□□□ 0.32
USP5-207ENST00000542371 RTN2O75298 545 aa17.07■□□□□ 0.32
USP5-207ENST00000542371 URI1O94763 535 aaPredicted RBP17.07■□□□□ 0.32
USP5-207ENST00000542371 TMEM253P0C7T8 217 aa17.07■□□□□ 0.32
USP5-207ENST00000542371 P4HA1P13674 534 aa17.07■□□□□ 0.32
USP5-207ENST00000542371 CHRNB2P17787 502 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms