RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 ECE1P42892 770 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 RXRGP48443 463 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 GALK1P51570 392 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 ASIC1P78348 528 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 DPYSQ14117 519 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 COG2Q14746 738 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 TOMM20Q15388 145 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 IGSF11Q5DX21 431 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 PRAMEF18Q5VWM3 479 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 SLC30A10Q6XR72 485 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 ADSSL1Q8N142 457 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 HELQQ8TDG4 1101 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 HGH1Q9BTY7 390 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 PPP1R12CQ9BZL4 782 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 BLOC1S4Q9NUP1 217 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 TBCCD1Q9NVR7 557 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 HACD3Q9P035 362 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 PDP2Q9P2J9 529 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 RWDD2AQ9UIY3 292 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 CDC23Q9UJX2 597 aa11.8□□□□□ -0.52
CDH3-203ENST00000542274 SBF1O95248 1867 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 LTBP3Q9NS15 1303 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 ESYT2A0FGR8 921 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 LRRC72A6NJI9 287 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 KCNJ18B7U540 433 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 STAT3P40763 770 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 KCNJ12Q14500 433 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 ZYXQ15942 572 aaKnown RBP11.79□□□□□ -0.52
CDH3-203ENST00000542274 KIAA1755Q5JYT7 1200 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 ZNF449Q6P9G9 518 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 RAD9BQ6WBX8 426 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 TMEM179Q6ZVK1 233 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 TMTC1Q8IUR5 882 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 ARL6IP6Q8N6S5 226 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 ACER1Q8TDN7 264 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 PRCCQ92733 491 aaPredicted RBP11.79□□□□□ -0.52
CDH3-203ENST00000542274 DPF3Q92784 378 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 P3H4Q92791 437 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 HEPHQ9BQS7 1158 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 PLVAPQ9BX97 442 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 SPATA16Q9BXB7 569 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 KANSL2Q9H9L4 492 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 LRWD1Q9UFC0 647 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 FZD1Q9UP38 647 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 GPC6Q9Y625 555 aaPredicted RBP11.79□□□□□ -0.52
CDH3-203ENST00000542274 POLR2AP24928 1970 aaKnown RBP11.79□□□□□ -0.52
CDH3-203ENST00000542274 F5H6K3 240 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 CHRNB1P11230 501 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 ETS2P15036 469 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 HOXC13P31276 330 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 TSPAN7P41732 249 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
CDH3-203ENST00000542274 KLRC3Q07444 240 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 IKQ13123 557 aaPredicted RBP11.79□□□□□ -0.52
CDH3-203ENST00000542274 MTMR3Q13615 1198 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 CTC1Q2NKJ3 1217 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 TCP11X2Q5H9J9 407 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 CCDC174Q6PII3 467 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 GPIHBP1Q8IV16 184 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 MTMR14Q8NCE2 650 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 STKLD1Q8NE28 680 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 TOR1AIP2Q8NFQ8 470 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 STARD8Q92502 1023 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 HAS1Q92839 578 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 GFM2Q969S9 779 aaKnown RBP11.79□□□□□ -0.52
CDH3-203ENST00000542274 ACAP3Q96P50 834 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 RIC8AQ9NPQ8 531 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDH3-203ENST00000542274 PCDHA1Q9Y5I3 950 aa11.79□□□□□ -0.52
CDH3-203ENST00000542274 MYMKA6NI61 221 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 FAM47E-STBD1D6RA91 191 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 FBP2O00757 339 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 ASMTLO95671 621 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 POLR2EP19388 210 aaKnown RBP11.78□□□□□ -0.52
CDH3-203ENST00000542274 CD53P19397 219 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 COPB1P53618 953 aaKnown RBP11.78□□□□□ -0.52
CDH3-203ENST00000542274 EAPPQ56P03 285 aaPredicted RBP11.78□□□□□ -0.52
CDH3-203ENST00000542274 PCGF5Q86SE9 256 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 ALDH16A1Q8IZ83 802 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 IRGQQ8WZA9 623 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 TBCBQ99426 244 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 MRPL44Q9H9J2 332 aaKnown RBP11.78□□□□□ -0.52
CDH3-203ENST00000542274 PCNTO95613 3336 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 LAD1O00515 517 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 HAT1O14929 419 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 NDUFB10O96000 172 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 KLK7P49862 253 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 CCR3P51677 355 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 ZNF280AP59817 542 aaPredicted RBP11.78□□□□□ -0.52
CDH3-203ENST00000542274 BASP1P80723 227 aaKnown RBP11.78□□□□□ -0.52
CDH3-203ENST00000542274 CACNB1Q02641 598 aaPredicted RBP11.78□□□□□ -0.52
CDH3-203ENST00000542274 GNA13Q14344 377 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 MYLK3Q32MK0 819 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 ODF2Q5BJF6 829 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 GPATCH4Q5T3I0 446 aaKnown RBP11.78□□□□□ -0.52
CDH3-203ENST00000542274 TTC39BQ5VTQ0 682 aaPredicted RBP11.78□□□□□ -0.52
CDH3-203ENST00000542274 SLC38A6Q8IZM9 456 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 KIAA0895Q8NCT3 520 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 TRPM4Q8TD43 1214 aa11.78□□□□□ -0.52
CDH3-203ENST00000542274 SNX29Q8TEQ0 813 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms