RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 GADD45BO75293 160 aaPredicted RBP10.59□□□□□ -0.71
YBX3-212ENST00000542002 NFICP08651 508 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 SPATA31D3P0C874 917 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 ABCD1P33897 745 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 GLUD2P49448 558 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 CLCN4P51793 760 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 DPYDQ12882 1025 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 AAK1Q2M2I8 961 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 USP41Q3LFD5 358 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 FAM26FQ5R3K3 315 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 JADE1Q6IE81 842 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 ANKRD54Q6NXT1 300 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 RSPO2Q6UXX9 243 aaPredicted RBP10.59□□□□□ -0.71
YBX3-212ENST00000542002 KRBA2Q6ZNG9 492 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 SPATA31D4Q6ZUB0 917 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 SYCP3Q8IZU3 236 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 SMRP1Q8NCR6 262 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 KIAA0895Q8NCT3 520 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 RIN2Q8WYP3 895 aaPredicted RBP10.59□□□□□ -0.71
YBX3-212ENST00000542002 PPP2R3CQ969Q6 453 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 FAM212AQ96EL1 285 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 KIF12Q96FN5 646 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 CLSTN3Q9BQT9 956 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 PYM1Q9BRP8 204 aaKnown RBP10.59□□□□□ -0.71
YBX3-212ENST00000542002 FAM213AQ9BRX8 229 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 APOL5Q9BWW9 433 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 USP25Q9UHP3 1055 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 CD207Q9UJ71 328 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 EXOC7Q9UPT5 735 aa10.59□□□□□ -0.71
YBX3-212ENST00000542002 RPN1P04843 607 aaKnown RBP10.58□□□□□ -0.72
YBX3-212ENST00000542002 WEE2P0C1S8 567 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 GARTP22102 1010 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 FGFR3P22607 806 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 KLRC2P26717 231 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 TKTP29401 623 aaKnown RBP10.58□□□□□ -0.72
YBX3-212ENST00000542002 RPL9P32969 192 aaKnown RBP10.58□□□□□ -0.72
YBX3-212ENST00000542002 ALCAMQ13740 583 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 POSTNQ15063 836 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 KYAT1Q16773 422 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 SPATA1Q5VX52 437 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 KIAA1841Q6NSI8 718 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 LILRA6Q6PI73 481 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 CEP57Q86XR8 500 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 PALB2Q86YC2 1186 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 GLYCTKQ8IVS8 523 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 NELFCDQ8IXH7 590 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 EFCAB13Q8IY85 973 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 DDX27Q96GQ7 796 aaKnown RBP10.58□□□□□ -0.72
YBX3-212ENST00000542002 UROC1Q96N76 676 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 TTPALQ9BTX7 342 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 TMEM206Q9H813 350 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 SLC38A7Q9NVC3 462 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 STK39Q9UEW8 545 aa10.58□□□□□ -0.72
YBX3-212ENST00000542002 CIZ1Q9ULV3 898 aaPredicted RBP10.58□□□□□ -0.72
YBX3-212ENST00000542002 SF3B1O75533 1304 aaKnown RBP eCLIP10.58□□□□□ -0.72
YBX3-212ENST00000542002 CLIC2O15247 247 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 SPTLC1O15269 473 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 EIF3DO15371 548 aaKnown RBP eCLIP10.57□□□□□ -0.72
YBX3-212ENST00000542002 TGM5O43548 720 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 EXTL3O43909 919 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 URODP06132 367 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 CYP3A5P20815 502 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 LRPAP1P30533 357 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 PPP2R3AQ06190 1150 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 BMS1Q14692 1282 aaKnown RBP10.57□□□□□ -0.72
YBX3-212ENST00000542002 SMAD2Q15796 467 aaKnown RBP10.57□□□□□ -0.72
YBX3-212ENST00000542002 BMT2Q1RMZ1 405 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 CBWD2Q8IUF1 395 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 CXorf38Q8TB03 319 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 PIK3R5Q8WYR1 880 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 SUSD6Q92537 303 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 ERCC4Q92889 916 aaPredicted RBP10.57□□□□□ -0.72
YBX3-212ENST00000542002 KHSRPQ92945 711 aaKnown RBP eCLIP10.57□□□□□ -0.722e-7■■□□□ 13.3
YBX3-212ENST00000542002 UHRF1Q96T88 793 aaPredicted RBP10.57□□□□□ -0.72
YBX3-212ENST00000542002 EMILIN2Q9BXX0 1053 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 AGPAT3Q9NRZ7 376 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 FNIP2Q9P278 1114 aa10.57□□□□□ -0.72
YBX3-212ENST00000542002 USP15Q9Y4E8 981 aaPredicted RBP10.57□□□□□ -0.72
YBX3-212ENST00000542002 MYH11P35749 1972 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 ANO9A1A5B4 782 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 PIRO00625 290 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 TBC1D4O60343 1298 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 POU5F1Q01860 360 aaKnown RBP10.56□□□□□ -0.72
YBX3-212ENST00000542002 SMAD4Q13485 552 aaKnown RBP10.56□□□□□ -0.72
YBX3-212ENST00000542002 PNOCQ13519 176 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 MRPL58Q14197 206 aaKnown RBP10.56□□□□□ -0.72
YBX3-212ENST00000542002 TMEM132DQ14C87 1099 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 KNOP1Q1ED39 458 aaKnown RBP10.56□□□□□ -0.72
YBX3-212ENST00000542002 PUS10Q3MIT2 529 aaKnown RBP10.56□□□□□ -0.72
YBX3-212ENST00000542002 C9orf57Q5W0N0 161 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.56□□□□□ -0.72
YBX3-212ENST00000542002 CD302Q8IX05 232 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 GPR65Q8IYL9 337 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 RDH13Q8NBN7 331 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 CASP10Q92851 521 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 BORCS6Q96GS4 357 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 SUSD3Q96L08 255 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 FBXL18Q96ME1 805 aa10.56□□□□□ -0.72
YBX3-212ENST00000542002 GZF1Q9H116 711 aaPredicted RBP10.56□□□□□ -0.72
YBX3-212ENST00000542002 KCTD10Q9H3F6 313 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms