RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 SOX9P48436 509 aa13.04□□□□□ -0.32
COPA-205ENST00000541366 CLCNKBP51801 687 aa13.04□□□□□ -0.32
COPA-205ENST00000541366 ROR1Q01973 937 aa13.04□□□□□ -0.32
COPA-205ENST00000541366 EEF1DP3Q658K8 133 aa13.04□□□□□ -0.32
COPA-205ENST00000541366 PPP4R3AQ6IN85 833 aa13.04□□□□□ -0.32
COPA-205ENST00000541366 PDXDC1Q6P996 788 aa13.04□□□□□ -0.32
COPA-205ENST00000541366 Q6ZS52 159 aa13.04□□□□□ -0.32
COPA-205ENST00000541366 NEK8Q86SG6 692 aa13.04□□□□□ -0.32
COPA-205ENST00000541366 TRIM22Q8IYM9 498 aa13.04□□□□□ -0.32
COPA-205ENST00000541366 FBXL16Q8N461 479 aa13.04□□□□□ -0.32
COPA-205ENST00000541366 FAM160A2Q8N612 972 aaPredicted RBP13.04□□□□□ -0.32
COPA-205ENST00000541366 AVENQ9NQS1 362 aaPredicted RBP13.04□□□□□ -0.32
COPA-205ENST00000541366 WDFY3Q8IZQ1 3526 aa13.04□□□□□ -0.32
COPA-205ENST00000541366 FASNP49327 2511 aaKnown RBP13.03□□□□□ -0.32
COPA-205ENST00000541366 CCDC194A0A1B0GVG4 234 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 ARHGEF37A1IGU5 675 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 K7ESF4 209 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 PRRG1O14668 218 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 MOSPD3O75425 235 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 DGAT1O75907 488 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 DEXIO95424 95 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 LIG1P18858 919 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 RARRES1P49788 294 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 ARPP19P56211 112 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 EVCP57679 992 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 STK3Q13188 491 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 TOB2Q14106 344 aaPredicted RBP13.03□□□□□ -0.32
COPA-205ENST00000541366 PPP2R5DQ14738 602 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 BMP2KLQ5H9B9 411 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 IL31Q6EBC2 164 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 PIK3AP1Q6ZUJ8 805 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 GPIHBP1Q8IV16 184 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 IRF7Q92985 503 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 RSPRY1Q96DX4 576 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 HSD17B14Q9BPX1 270 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 FZD8Q9H461 694 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
COPA-205ENST00000541366 BACE2Q9Y5Z0 518 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 IGF2RP11717 2491 aa13.03□□□□□ -0.32
COPA-205ENST00000541366 TM4SF5O14894 197 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 AXIN1O15169 862 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 GCFC2P16383 781 aaKnown RBP13.02□□□□□ -0.33
COPA-205ENST00000541366 PSMC3P17980 439 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 PTGDRQ13258 359 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 TMEM132AQ24JP5 1023 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 AASDHQ4L235 1098 aaPredicted RBP13.02□□□□□ -0.33
COPA-205ENST00000541366 CEP68Q76N32 757 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 LONP2Q86WA8 852 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 TTC8Q8TAM2 541 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 BSNDQ8WZ55 320 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 SMARCD2Q92925 531 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 CCDC43Q96MW1 224 aaKnown RBP13.02□□□□□ -0.33
COPA-205ENST00000541366 ARRDC1-AS1Q9H2J1 176 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 SMOC1Q9H4F8 434 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 CYP4F11Q9HBI6 524 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 ANKEF1Q9NU02 776 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 PRMT7Q9NVM4 692 aaPredicted RBP13.02□□□□□ -0.33
COPA-205ENST00000541366 SPAG17Q6Q759 2223 aa13.02□□□□□ -0.33
COPA-205ENST00000541366 PDCD11Q14690 1871 aaKnown RBP13.02□□□□□ -0.33
COPA-205ENST00000541366 GREB1Q4ZG55 1949 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 SLC38A8A6NNN8 435 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 TMEM189-UBE2V1I3L0A0 370 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 ARNTLO00327 626 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 CPLX1O14810 134 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 ZNF263O14978 683 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 N4BP3O15049 544 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 ABLIM3O94929 683 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 PRKCBP05771 671 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 ELF1P32519 619 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 HSPA4P34932 840 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 SOX4Q06945 474 aaPredicted RBP13.01□□□□□ -0.33
COPA-205ENST00000541366 UPP1Q16831 310 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 GALNT17Q6IS24 598 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 SLC8B1Q6J4K2 584 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 TXNDC11Q6PKC3 985 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 ANKS3Q6ZW76 656 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 PDZD4Q76G19 769 aaPredicted RBP13.01□□□□□ -0.33
COPA-205ENST00000541366 RTL10Q7L3V2 364 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 SPEM1Q8N4L4 309 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 ZNF461Q8TAF7 563 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 PRIMPOLQ96LW4 560 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 PPP1R10Q96QC0 940 aaKnown RBP13.01□□□□□ -0.33
COPA-205ENST00000541366 IER2Q9BTL4 223 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 POLD4Q9HCU8 107 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 TRPV5Q9NQA5 729 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 CEP72Q9P209 647 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 INSL5Q9Y5Q6 135 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 ATG2BQ96BY7 2078 aa13.01□□□□□ -0.33
COPA-205ENST00000541366 HEPACAM2A8MVW5 462 aa13□□□□□ -0.33
COPA-205ENST00000541366 C1QTNF9BB2RNN3 333 aa13□□□□□ -0.33
COPA-205ENST00000541366 LYPLA2O95372 231 aa13□□□□□ -0.33
COPA-205ENST00000541366 C1QTNF9P0C862 333 aa13□□□□□ -0.33
COPA-205ENST00000541366 MYL4P12829 197 aa13□□□□□ -0.33
COPA-205ENST00000541366 PXNP49023 591 aaPredicted RBP13□□□□□ -0.33
COPA-205ENST00000541366 SHC2P98077 582 aa13□□□□□ -0.33
COPA-205ENST00000541366 PRPF4BQ13523 1007 aaKnown RBP13□□□□□ -0.33
COPA-205ENST00000541366 TEAD2Q15562 447 aa13□□□□□ -0.33
COPA-205ENST00000541366 FAM187BQ17R55 369 aa13□□□□□ -0.33
COPA-205ENST00000541366 CDCA2Q69YH5 1023 aaPredicted RBP13□□□□□ -0.33
COPA-205ENST00000541366 MFSD6LQ8IWD5 586 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms