RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 PKN2Q16513 984 aaKnown RBP13.73□□□□□ -0.21
MSH6-210ENST00000540021 WLSQ5T9L3 541 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 POLR3CQ9BUI4 534 aaPredicted RBP13.73□□□□□ -0.21
MSH6-210ENST00000540021 SCAF8Q9UPN6 1271 aaKnown RBP13.73□□□□□ -0.21
MSH6-210ENST00000540021 GNAT1P11488 350 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 MARK3P27448 753 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 ECE1P42892 770 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 C11orf63Q6NUN7 778 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 SLFN11Q7Z7L1 901 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 MORC4Q8TE76 937 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 KIAA1683Q9H0B3 1180 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 LRRC4BQ9NT99 713 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 STXBP5LQ9Y2K9 1186 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 PCDHA2Q9Y5H9 948 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 DDTLA6NHG4 134 aaPredicted RBP13.73□□□□□ -0.21
MSH6-210ENST00000540021 H7C0C1 242 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 ZBED4O75132 1171 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 ZCCHC18P0CG32 403 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 RFX1P22670 979 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 ATP5OP48047 213 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 ACOT2P49753 483 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 CRELD2Q6UXH1 353 aaPredicted RBP13.73□□□□□ -0.21
MSH6-210ENST00000540021 PIGWQ7Z7B1 504 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 C10orf88Q9H8K7 445 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 PCDHAC2Q9Y5I4 1007 aa13.73□□□□□ -0.21
MSH6-210ENST00000540021 TJP3O95049 919 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 ENO1P06733 434 aaKnown RBP13.72□□□□□ -0.21
MSH6-210ENST00000540021 SREBF1P36956 1147 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 SOX10P56693 466 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 TMPRSS15P98073 1019 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 SMTNL2Q2TAL5 461 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 MTERF2Q49AM1 385 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 PDIK1LQ8N165 341 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 TTC8Q8TAM2 541 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 EPS8L1Q8TE68 723 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 CCDC124Q96CT7 223 aaKnown RBP13.72□□□□□ -0.21
MSH6-210ENST00000540021 PCDHB18PQ96TA0 734 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 FBXO28Q9NVF7 368 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 WHRNQ9P202 907 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 HEY2Q9UBP5 337 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 O00370 1275 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 CAPN9O14815 690 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 STAM2O75886 525 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 KCNA3P22001 575 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 POLGP54098 1239 aaPredicted RBP13.72□□□□□ -0.21
MSH6-210ENST00000540021 EPHB1P54762 984 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 BPIFB4P59827 614 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 ARHGEF16Q5VV41 709 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 PCYOX1Q9UHG3 505 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 NCANO14594 1321 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 LPXNO60711 386 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 GNA15P30679 374 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 QARSP47897 775 aaKnown RBP13.72□□□□□ -0.21
MSH6-210ENST00000540021 JAM2P57087 298 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 OSTNP61366 133 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 PPP2R5DQ14738 602 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 PCNX4Q63HM2 1172 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 DEPTORQ8TB45 409 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 TRIM11Q96F44 468 aa13.72□□□□□ -0.21
MSH6-210ENST00000540021 NXF1Q9UBU9 619 aaKnown RBP13.72□□□□□ -0.21
MSH6-210ENST00000540021 G3BP2Q9UN86 482 aaKnown RBP13.72□□□□□ -0.21
MSH6-210ENST00000540021 F5H423 210 aaPredicted RBP13.71□□□□□ -0.21
MSH6-210ENST00000540021 LGR5O75473 907 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 UNC5CO95185 931 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 P4HBP07237 508 aaKnown RBP13.71□□□□□ -0.21
MSH6-210ENST00000540021 ETS1P14921 441 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 HOXD13P35453 343 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 PGM1P36871 562 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 MTMR1Q13613 665 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 HIF1AQ16665 826 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 ECHDC2Q86YB7 292 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 CYP4X1Q8N118 509 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 PPM1NQ8N819 430 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 ETNPPLQ8TBG4 499 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 PARD3BQ8TEW8 1205 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 JDP2Q8WYK2 163 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 ART4Q93070 314 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 PCDHA3Q9Y5H8 950 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 BANF1O75531 89 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 TOM1L1O75674 476 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 AP1G2O75843 785 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 SPOPLQ6IQ16 392 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 ACAD10Q6JQN1 1059 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 SDCCAG8Q86SQ7 713 aaPredicted RBP13.71□□□□□ -0.21
MSH6-210ENST00000540021 HSPH1Q92598 858 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 TXNDC16Q9P2K2 825 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 SPATA31A1Q5TZJ5 1347 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 YWHABP31946 246 aaKnown RBP13.71□□□□□ -0.21
MSH6-210ENST00000540021 C1orf146Q5VVC0 180 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 C3orf62Q6ZUJ4 267 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 ZBTB33Q86T24 672 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 SMC1BQ8NDV3 1235 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 TBC1D10AQ9BXI6 508 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 C12orf65Q9H3J6 166 aaKnown RBP13.71□□□□□ -0.21
MSH6-210ENST00000540021 SLC12A4Q9UP95 1085 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 CHMP2BQ9UQN3 213 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 R3HDM2Q9Y2K5 976 aaKnown RBP13.71□□□□□ -0.21
MSH6-210ENST00000540021 SUGT1Q9Y2Z0 365 aa13.71□□□□□ -0.21
MSH6-210ENST00000540021 C21orf2O43822 256 aa13.71□□□□□ -0.22
MSH6-210ENST00000540021 RPA3P35244 121 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms