RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 KIAA0355O15063 1070 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 NRDCO43847 1150 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 PHACTR2O75167 634 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 NOL4O94818 638 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 HLA-DRAP01903 254 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 NFICP08651 508 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 UCHL3P15374 230 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 KCNE1P15382 129 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 EN2P19622 333 aaPredicted RBP11.49□□□□□ -0.57
LEMD3-202ENST00000539442 AKAP5P24588 427 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 PIK3CAP42336 1068 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 FXR1P51114 621 aaKnown RBP eCLIP11.49□□□□□ -0.57
LEMD3-202ENST00000539442 LSM11P83369 360 aaKnown RBP eCLIP11.49□□□□□ -0.57
LEMD3-202ENST00000539442 SMYD5Q6GMV2 418 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 SLC24A5Q71RS6 500 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 TRAPPC11Q7Z392 1133 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 CACNA2D4Q7Z3S7 1137 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 FMNL3Q8IVF7 1028 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 TC2NQ8N9U0 490 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 TAS1R2Q8TE23 839 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 TRIM44Q96DX7 344 aaPredicted RBP11.49□□□□□ -0.57
LEMD3-202ENST00000539442 NT5C1BQ96P26 610 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 PANX2Q96RD6 677 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 APOL6Q9BWW8 343 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 IMPG2Q9BZV3 1241 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 MTMR12Q9C0I1 747 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 ITGA11Q9UKX5 1188 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 MYO6Q9UM54 1294 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 UBQLN1Q9UMX0 589 aaKnown RBP11.49□□□□□ -0.57
LEMD3-202ENST00000539442 RALGAPA2Q2PPJ7 1873 aa11.49□□□□□ -0.57
LEMD3-202ENST00000539442 EPHB6O15197 1021 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 VNN1O95497 513 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 EOMESO95936 686 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 ACTN1P12814 892 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 CYP3A5P20815 502 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 CYP2C18P33260 490 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 KRT9P35527 623 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 CCL23P55773 120 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 POLR2FP61218 127 aaKnown RBP11.48□□□□□ -0.57
LEMD3-202ENST00000539442 TRPC3Q13507 836 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 NCOA4Q13772 614 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 ZBTB6Q15916 424 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 WDR44Q5JSH3 913 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 ENOSF1Q7L5Y1 443 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 ZNF598Q86UK7 904 aaKnown RBP11.48□□□□□ -0.57
LEMD3-202ENST00000539442 ECHDC2Q86YB7 292 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 C1orf127Q8N9H9 656 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 CCDC112Q8NEF3 446 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 DBF4BQ8NFT6 615 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 BEST2Q8NFU1 509 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 OR8K1Q8NGG5 319 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 CPLX3Q8WVH0 158 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 TAF4BQ92750 862 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 SEMA4DQ92854 862 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 SCLYQ96I15 445 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 FAXDC2Q96IV6 333 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 DNAJC7Q99615 494 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 ELAC1Q9H777 363 aaKnown RBP11.48□□□□□ -0.57
LEMD3-202ENST00000539442 RSAD1Q9HA92 442 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 ABHD10Q9NUJ1 306 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 SLC38A7Q9NVC3 462 aa11.48□□□□□ -0.57
LEMD3-202ENST00000539442 SMIM28A0A1B0GU29 152 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 INPPL1O15357 1258 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 STAU1O95793 577 aaKnown RBP11.47□□□□□ -0.57
LEMD3-202ENST00000539442 ASS1P00966 412 aaKnown RBP11.47□□□□□ -0.57
LEMD3-202ENST00000539442 TIMP1P01033 207 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 ATF7P17544 494 aaPredicted RBP11.47□□□□□ -0.57
LEMD3-202ENST00000539442 FECHP22830 423 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 ATICP31939 592 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 HNRNPH3P31942 346 aaKnown RBP11.47□□□□□ -0.57
LEMD3-202ENST00000539442 ADKP55263 362 aaKnown RBP11.47□□□□□ -0.57
LEMD3-202ENST00000539442 FAM189BP81408 668 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 GCNT1Q02742 428 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 SGSM1Q2NKQ1 1148 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 TSR1Q2NL82 804 aaKnown RBP11.47□□□□□ -0.57
LEMD3-202ENST00000539442 PDXDC1Q6P996 788 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 AGMOQ6ZNB7 445 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 RTN4RL1Q86UN2 441 aaPredicted RBP11.47□□□□□ -0.57
LEMD3-202ENST00000539442 LRRC8AQ8IWT6 810 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 LINC01599Q8WXQ3 324 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 RSPH1Q8WYR4 309 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 BAP1Q92560 729 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 SYN2Q92777 582 aaPredicted RBP11.47□□□□□ -0.57
LEMD3-202ENST00000539442 ZMAT2Q96NC0 199 aaKnown RBP11.47□□□□□ -0.57
LEMD3-202ENST00000539442 SPAG5Q96R06 1193 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 RPS6KC1Q96S38 1066 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 NAA15Q9BXJ9 866 aaKnown RBP11.47□□□□□ -0.57
LEMD3-202ENST00000539442 R3HCC1Q9Y3T6 440 aaKnown RBP11.47□□□□□ -0.57
LEMD3-202ENST00000539442 FHOD1Q9Y613 1164 aa11.47□□□□□ -0.57
LEMD3-202ENST00000539442 TRIM43BA6NCK2 446 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 LRRC53A6NM62 1247 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 RNF225M0QZC1 329 aaPredicted RBP11.46□□□□□ -0.57
LEMD3-202ENST00000539442 PTGESO14684 152 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 CST3P01034 146 aaPredicted RBP11.46□□□□□ -0.57
LEMD3-202ENST00000539442 PFKMP08237 780 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 RAG1P15918 1043 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 TBXAS1P24557 533 aaPredicted RBP11.46□□□□□ -0.57
LEMD3-202ENST00000539442 MLH1P40692 756 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 MFAP3P55082 362 aa11.46□□□□□ -0.57
LEMD3-202ENST00000539442 NOP14P78316 857 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms