RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 KRT31Q15323 416 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 SEZ6Q53EL9 994 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 JADE1Q6IE81 842 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 ALKAL1Q6UXT8 129 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 GBP6Q6ZN66 633 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 AGMOQ6ZNB7 445 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 LRRC8AQ8IWT6 810 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 CMTR2Q8IYT2 770 aaKnown RBP11.04□□□□□ -0.64
CLPB-210ENST00000539148 TTC39CQ8N584 583 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 CEP120Q8N960 986 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 FBXL13Q8NEE6 735 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 SLC35C1Q96A29 364 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 BORCS6Q96GS4 357 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 RNPC3Q96LT9 517 aaKnown RBP11.04□□□□□ -0.64
CLPB-210ENST00000539148 MED15Q96RN5 788 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 GAD1Q99259 594 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.04□□□□□ -0.643e-7■■■■■ 35.2
CLPB-210ENST00000539148 TMEM175Q9BSA9 504 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 FAM124BQ9H5Z6 455 aaPredicted RBP11.04□□□□□ -0.64
CLPB-210ENST00000539148 DPP3Q9NY33 737 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.04□□□□□ -0.64
CLPB-210ENST00000539148 INPP5FQ9Y2H2 1132 aa11.04□□□□□ -0.64
CLPB-210ENST00000539148 LRRIQ3A6PVS8 624 aaPredicted RBP11.03□□□□□ -0.64
CLPB-210ENST00000539148 TBKBP1A7MCY6 615 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 LGALS16A8MUM7 142 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 AP5Z1O43299 807 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 DGKIO75912 1065 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 ALDH2P05091 517 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 RFX1P22670 979 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 PPM1AP35813 382 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 PIK3CAP42336 1068 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 FMO5P49326 533 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 ALDH7A1P49419 539 aaKnown RBP11.03□□□□□ -0.64
CLPB-210ENST00000539148 YWHAEP62258 255 aaKnown RBP11.03□□□□□ -0.64
CLPB-210ENST00000539148 UBXN1Q04323 297 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 BTG3Q14201 252 aaPredicted RBP11.03□□□□□ -0.64
CLPB-210ENST00000539148 SGSM1Q2NKQ1 1148 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 HSP90AA4PQ58FG1 418 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 HABP4Q5JVS0 413 aaKnown RBP11.03□□□□□ -0.64
CLPB-210ENST00000539148 SPOUT1Q5T280 376 aaKnown RBP11.03□□□□□ -0.64
CLPB-210ENST00000539148 IRF2BP1Q8IU81 584 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 LRRC52Q8N7C0 313 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 SPC24Q8NBT2 197 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 HELQQ8TDG4 1101 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 LINC01599Q8WXQ3 324 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 PCMTD1Q96MG8 357 aaPredicted RBP11.03□□□□□ -0.64
CLPB-210ENST00000539148 RAD9AQ99638 391 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 NUP58Q9BVL2 599 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 COLEC11Q9BWP8 271 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 OSBPL7Q9BZF2 842 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 VPS16Q9H269 839 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 KLK14Q9P0G3 267 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 IFNKQ9P0W0 207 aa11.03□□□□□ -0.64
CLPB-210ENST00000539148 GOLGA6L9A6NEM1 432 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 TLL1O43897 1013 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 GJB5O95377 273 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 KRT19P08727 400 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 LAG3P18627 525 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 GCLMP48507 274 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 ELAVL2Q12926 359 aaKnown RBP11.02□□□□□ -0.65
CLPB-210ENST00000539148 TRIM14Q14142 442 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 BMS1Q14692 1282 aaKnown RBP11.02□□□□□ -0.65
CLPB-210ENST00000539148 ZBTB6Q15916 424 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 EXOC3L4Q17RC7 722 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 ZACNQ401N2 412 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 SV2CQ496J9 727 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 DNTTIP2Q5QJE6 756 aaKnown RBP11.02□□□□□ -0.65
CLPB-210ENST00000539148 ZBTB41Q5SVQ8 909 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLPB-210ENST00000539148 SV2AQ7L0J3 742 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 ENOSF1Q7L5Y1 443 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 TRAPPC11Q7Z392 1133 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 HERC6Q8IVU3 1022 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 TMEM192Q8IY95 271 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 FIBCD1Q8N539 461 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 LPPQ93052 612 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 SAMD11Q96NU1 681 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 PPP1R10Q96QC0 940 aaKnown RBP11.02□□□□□ -0.65
CLPB-210ENST00000539148 XPO4Q9C0E2 1151 aaKnown RBP11.02□□□□□ -0.65
CLPB-210ENST00000539148 MMRN2Q9H8L6 949 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 TAB2Q9NYJ8 693 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 NUB1Q9Y5A7 615 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 PCDHB12Q9Y5F1 795 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLPB-210ENST00000539148 SZT2Q5T011 3432 aa11.02□□□□□ -0.65
CLPB-210ENST00000539148 COL4A6Q14031 1691 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 A0A1B0GTH6 734 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.01□□□□□ -0.65
CLPB-210ENST00000539148 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.01□□□□□ -0.65
CLPB-210ENST00000539148 A0A1W2PPC1 479 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 A0A1W2PQC6 194 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 H0YGN5 161 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 STAU1O95793 577 aaKnown RBP11.01□□□□□ -0.65
CLPB-210ENST00000539148 POMCP01189 267 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 NFICP08651 508 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 TRIM49P0CI25 452 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 TRIM49CP0CI26 452 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 FGFR1P11362 822 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 ATP1A3P13637 1013 aa11.01□□□□□ -0.65
CLPB-210ENST00000539148 TBXAS1P24557 533 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms