RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 TNNC2P02585 160 aa21.87■■□□□ 1.09
DDX55-205ENST00000538744 TMEM191BP0C7N4 346 aa21.87■■□□□ 1.09
DDX55-205ENST00000538744 ZNF865P0CJ78 1059 aaPredicted RBP21.87■■□□□ 1.09
DDX55-205ENST00000538744 RGS2P41220 211 aa21.87■■□□□ 1.09
DDX55-205ENST00000538744 OSTNP61366 133 aa21.87■■□□□ 1.09
DDX55-205ENST00000538744 TFAMQ00059 246 aaKnown RBP21.87■■□□□ 1.09
DDX55-205ENST00000538744 ACAD10Q6JQN1 1059 aa21.87■■□□□ 1.09
DDX55-205ENST00000538744 ZNF410Q86VK4 478 aa21.87■■□□□ 1.09
DDX55-205ENST00000538744 ANKRD36BP1Q96IX9 119 aa21.87■■□□□ 1.09
DDX55-205ENST00000538744 SCLT1Q96NL6 688 aa21.87■■□□□ 1.09
DDX55-205ENST00000538744 ZFYVE28Q9HCC9 887 aa21.87■■□□□ 1.09
DDX55-205ENST00000538744 OGFRQ9NZT2 677 aa21.87■■□□□ 1.09
DDX55-205ENST00000538744 CNTN6Q9UQ52 1028 aa21.87■■□□□ 1.09
DDX55-205ENST00000538744 TRPC3Q13507 836 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 PTPROQ16827 1216 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 LONRF2Q1L5Z9 754 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 SGSM1Q2NKQ1 1148 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 UMODL1Q5DID0 1318 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 OLFML2BQ68BL8 750 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 C11orf63Q6NUN7 778 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 TLK2Q86UE8 772 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 CEP120Q8N960 986 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 RUBCNQ92622 972 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 PDZD7Q9H5P4 517 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 GTF3C4Q9UKN8 822 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 GPR25O00155 361 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 F2P00734 622 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 CST3P01034 146 aaPredicted RBP21.86■■□□□ 1.09
DDX55-205ENST00000538744 CYP1A2P05177 515 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 POU5F1Q01860 360 aaKnown RBP21.86■■□□□ 1.09
DDX55-205ENST00000538744 KYAT1Q16773 422 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 EFCAB13Q8IY85 973 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 KIAA0319LQ8IZA0 1049 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 SOCS4Q8WXH5 440 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 ZNF653Q96CK0 615 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 APBA2Q99767 749 aa21.86■■□□□ 1.09
DDX55-205ENST00000538744 RBM12Q9NTZ6 932 aaKnown RBP21.86■■□□□ 1.09
DDX55-205ENST00000538744 CEP104O60308 925 aa21.85■■□□□ 1.09
DDX55-205ENST00000538744 CSDE1O75534 798 aaKnown RBP21.85■■□□□ 1.09
DDX55-205ENST00000538744 CXCL8P10145 99 aa21.85■■□□□ 1.09
DDX55-205ENST00000538744 CYP2B6P20813 491 aa21.85■■□□□ 1.09
DDX55-205ENST00000538744 CYP2C19P33261 490 aa21.85■■□□□ 1.09
DDX55-205ENST00000538744 MYL6P60660 151 aa21.85■■□□□ 1.09
DDX55-205ENST00000538744 SREBF2Q12772 1141 aa21.85■■□□□ 1.09
DDX55-205ENST00000538744 CCL14Q16627 93 aa21.85■■□□□ 1.09
DDX55-205ENST00000538744 TMEM270Q6UE05 265 aa21.85■■□□□ 1.09
DDX55-205ENST00000538744 USP38Q8NB14 1042 aa21.85■■□□□ 1.09
DDX55-205ENST00000538744 RBBP8NLQ8NC74 664 aaPredicted RBP21.85■■□□□ 1.09
DDX55-205ENST00000538744 ACTRT1Q8TDG2 376 aa21.85■■□□□ 1.09
DDX55-205ENST00000538744 SETD4Q9NVD3 440 aa21.85■■□□□ 1.09
DDX55-205ENST00000538744 PASKQ96RG2 1323 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 ERLIN2O94905 339 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 CALCAP01258 141 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 STAG3L1P0CL83 205 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 ARF4P18085 180 aaPredicted RBP21.84■■□□□ 1.09
DDX55-205ENST00000538744 SMYD5Q6GMV2 418 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 TRIM72Q6ZMU5 477 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 UBR7Q8N806 425 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 UBE2Q2Q8WVN8 375 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 CPB2Q96IY4 423 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 NIF3L1Q9GZT8 377 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 FAM53CQ9NYF3 392 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 UVRAGQ9P2Y5 699 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 NRCAMQ92823 1304 aa21.84■■□□□ 1.09
DDX55-205ENST00000538744 SPDYE4A6NLX3 237 aa21.83■■□□□ 1.09
DDX55-205ENST00000538744 TBC1D8O95759 1140 aa21.83■■□□□ 1.09
DDX55-205ENST00000538744 SMIM10L2AP0DMW4 78 aa21.83■■□□□ 1.09
DDX55-205ENST00000538744 SMIM10L2BP0DMW5 78 aa21.83■■□□□ 1.09
DDX55-205ENST00000538744 UNGP13051 313 aaPredicted RBP21.83■■□□□ 1.09
DDX55-205ENST00000538744 GNA15P30679 374 aa21.83■■□□□ 1.09
DDX55-205ENST00000538744 GLE1Q53GS7 698 aaKnown RBP21.83■■□□□ 1.09
DDX55-205ENST00000538744 BEND6Q5SZJ8 279 aaPredicted RBP21.83■■□□□ 1.09
DDX55-205ENST00000538744 TMEM192Q8IY95 271 aa21.83■■□□□ 1.09
DDX55-205ENST00000538744 TRIM11Q96F44 468 aa21.83■■□□□ 1.09
DDX55-205ENST00000538744 LRRC1Q9BTT6 524 aa21.83■■□□□ 1.09
DDX55-205ENST00000538744 PGRMC1O00264 195 aaKnown RBP21.83■■□□□ 1.08
DDX55-205ENST00000538744 TNPO2O14787 897 aaKnown RBP21.83■■□□□ 1.08
DDX55-205ENST00000538744 ATMINO43313 823 aaPredicted RBP21.83■■□□□ 1.08
DDX55-205ENST00000538744 TSPAN1O60635 241 aa21.83■■□□□ 1.08
DDX55-205ENST00000538744 CPT1AP50416 773 aa21.83■■□□□ 1.08
DDX55-205ENST00000538744 CDC42EP1Q00587 391 aa21.83■■□□□ 1.08
DDX55-205ENST00000538744 ZNF699Q32M78 642 aa21.83■■□□□ 1.08
DDX55-205ENST00000538744 SCARA3Q6AZY7 606 aa21.83■■□□□ 1.08
DDX55-205ENST00000538744 C8orf74Q6P047 294 aa21.83■■□□□ 1.08
DDX55-205ENST00000538744 RASGEF1CQ8N431 466 aa21.83■■□□□ 1.08
DDX55-205ENST00000538744 ZNF564Q8TBZ8 553 aaPredicted RBP21.83■■□□□ 1.08
DDX55-205ENST00000538744 KAT2BQ92831 832 aa21.83■■□□□ 1.08
DDX55-205ENST00000538744 CCDC102AQ96A19 550 aa21.83■■□□□ 1.08
DDX55-205ENST00000538744 NUP85Q9BW27 656 aa21.83■■□□□ 1.08
DDX55-205ENST00000538744 GJD2Q9UKL4 321 aa21.83■■□□□ 1.08
DDX55-205ENST00000538744 TLL2Q9Y6L7 1015 aa21.83■■□□□ 1.08
DDX55-205ENST00000538744 FAM155AB1AL88 458 aaPredicted RBP21.82■■□□□ 1.08
DDX55-205ENST00000538744 DDX3YO15523 660 aaKnown RBP21.82■■□□□ 1.08
DDX55-205ENST00000538744 CYP1A1P04798 512 aaPredicted RBP21.82■■□□□ 1.08
DDX55-205ENST00000538744 ZNF132P52740 706 aa21.82■■□□□ 1.08
DDX55-205ENST00000538744 TNNC1P63316 161 aa21.82■■□□□ 1.08
DDX55-205ENST00000538744 CRHR2Q13324 411 aa21.82■■□□□ 1.08
DDX55-205ENST00000538744 MFSD10Q14728 455 aa21.82■■□□□ 1.08
DDX55-205ENST00000538744 MAP9Q49MG5 647 aa21.82■■□□□ 1.08
DDX55-205ENST00000538744 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.82■■□□□ 1.087e-8■■■□□ 15.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms