RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 BEST2Q8NFU1 509 aa26.2■■□□□ 1.79
HMGA2-208ENST00000537429 YME1L1Q96TA2 773 aa26.2■■□□□ 1.79
HMGA2-208ENST00000537429 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.2■■□□□ 1.79
HMGA2-208ENST00000537429 DDHD2O94830 711 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 SERPINC1P01008 464 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 TNNC2P02585 160 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 TPM2P07951 284 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 PAN2Q504Q3 1202 aaKnown RBP26.19■■□□□ 1.78
HMGA2-208ENST00000537429 TDRD10Q5VZ19 366 aaKnown RBP26.19■■□□□ 1.78
HMGA2-208ENST00000537429 KRT39Q6A163 491 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 CHRDL2Q6WN34 429 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 ZNF280BQ86YH2 543 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 C1orf127Q8N9H9 656 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 DPP3Q9NY33 737 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 RANBP2P49792 3224 aaKnown RBP26.19■■□□□ 1.78
HMGA2-208ENST00000537429 PMM2O15305 246 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 MXI1P50539 228 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 GUCY2FP51841 1108 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 RNASELQ05823 741 aaKnown RBP26.19■■□□□ 1.78
HMGA2-208ENST00000537429 DSC1Q08554 894 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 CMTR2Q8IYT2 770 aaKnown RBP26.19■■□□□ 1.78
HMGA2-208ENST00000537429 LRRC43Q8N309 656 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 TMEM130Q8N3G9 435 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 CXorf38Q8TB03 319 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 GOLGA2P5Q9HBQ8 144 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 INSL6Q9Y581 213 aa26.19■■□□□ 1.78
HMGA2-208ENST00000537429 TUSC3Q13454 348 aa26.18■■□□□ 1.78
HMGA2-208ENST00000537429 NAP1L5Q96NT1 182 aaPredicted RBP26.18■■□□□ 1.78
HMGA2-208ENST00000537429 RAD9AQ99638 391 aa26.18■■□□□ 1.78
HMGA2-208ENST00000537429 NRDE2Q9H7Z3 1164 aa26.18■■□□□ 1.78
HMGA2-208ENST00000537429 ITGA11Q9UKX5 1188 aa26.18■■□□□ 1.78
HMGA2-208ENST00000537429 COQ4Q9Y3A0 265 aa26.18■■□□□ 1.78
HMGA2-208ENST00000537429 A0A1B0GTH6 734 aa26.17■■□□□ 1.78
HMGA2-208ENST00000537429 FSD2A1L4K1 749 aa26.17■■□□□ 1.78
HMGA2-208ENST00000537429 LGALS16A8MUM7 142 aa26.17■■□□□ 1.78
HMGA2-208ENST00000537429 P4HA2O15460 535 aa26.17■■□□□ 1.78
HMGA2-208ENST00000537429 TLL1O43897 1013 aa26.17■■□□□ 1.78
HMGA2-208ENST00000537429 B4GALT3O60512 393 aa26.17■■□□□ 1.78
HMGA2-208ENST00000537429 N4BP1O75113 896 aaKnown RBP26.17■■□□□ 1.78
HMGA2-208ENST00000537429 CST3P01034 146 aaPredicted RBP26.17■■□□□ 1.78
HMGA2-208ENST00000537429 LRPAP1P30533 357 aa26.17■■□□□ 1.78
HMGA2-208ENST00000537429 BIRC3Q13489 604 aa26.17■■□□□ 1.78
HMGA2-208ENST00000537429 SCARA3Q6AZY7 606 aa26.17■■□□□ 1.78
HMGA2-208ENST00000537429 COLGALT2Q8IYK4 626 aa26.17■■□□□ 1.78
HMGA2-208ENST00000537429 RTN4Q9NQC3 1192 aaKnown RBP26.17■■□□□ 1.78
HMGA2-208ENST00000537429 SIX4Q9UIU6 781 aa26.17■■□□□ 1.78
HMGA2-208ENST00000537429 ANO9A1A5B4 782 aa26.16■■□□□ 1.78
HMGA2-208ENST00000537429 PES1O00541 588 aaKnown RBP26.16■■□□□ 1.78
HMGA2-208ENST00000537429 VNN1O95497 513 aa26.16■■□□□ 1.78
HMGA2-208ENST00000537429 ITGB3P05106 788 aa26.16■■□□□ 1.78
HMGA2-208ENST00000537429 MYL7Q01449 175 aa26.16■■□□□ 1.78
HMGA2-208ENST00000537429 BTG3Q14201 252 aaPredicted RBP26.16■■□□□ 1.78
HMGA2-208ENST00000537429 TDHQ8IZJ6 230 aa26.16■■□□□ 1.78
HMGA2-208ENST00000537429 FAM193BQ96PV7 902 aaPredicted RBP26.16■■□□□ 1.78
HMGA2-208ENST00000537429 PRO3102Q9H379 93 aa26.16■■□□□ 1.78
HMGA2-208ENST00000537429 HCSTQ9UBK5 93 aa26.16■■□□□ 1.78
HMGA2-208ENST00000537429 AP5Z1O43299 807 aa26.15■■□□□ 1.78
HMGA2-208ENST00000537429 UBASH3AP57075 661 aa26.15■■□□□ 1.78
HMGA2-208ENST00000537429 FILIP1LQ4L180 1135 aa26.15■■□□□ 1.78
HMGA2-208ENST00000537429 SARM1Q6SZW1 724 aa26.15■■□□□ 1.78
HMGA2-208ENST00000537429 TAS1R2Q8TE23 839 aa26.15■■□□□ 1.78
HMGA2-208ENST00000537429 CWH43Q9H720 699 aa26.15■■□□□ 1.78
HMGA2-208ENST00000537429 CACNG4Q9UBN1 327 aa26.15■■□□□ 1.78
HMGA2-208ENST00000537429 DNAJB4Q9UDY4 337 aa26.15■■□□□ 1.78
HMGA2-208ENST00000537429 GTPBP10A4D1E9 387 aaKnown RBP26.14■■□□□ 1.78
HMGA2-208ENST00000537429 CASTOR2A6NHX0 329 aa26.14■■□□□ 1.78
HMGA2-208ENST00000537429 PIRO00625 290 aa26.14■■□□□ 1.78
HMGA2-208ENST00000537429 PHACTR2O75167 634 aa26.14■■□□□ 1.78
HMGA2-208ENST00000537429 RPL9P32969 192 aaKnown RBP26.14■■□□□ 1.78
HMGA2-208ENST00000537429 CLCNKBP51801 687 aa26.14■■□□□ 1.78
HMGA2-208ENST00000537429 RABGGTBP53611 331 aa26.14■■□□□ 1.78
HMGA2-208ENST00000537429 NR1I3Q14994 352 aa26.14■■□□□ 1.78
HMGA2-208ENST00000537429 C9orf57Q5W0N0 161 aa26.14■■□□□ 1.78
HMGA2-208ENST00000537429 FAM109BQ6ICB4 259 aaPredicted RBP26.14■■□□□ 1.78
HMGA2-208ENST00000537429 FBXL13Q8NEE6 735 aa26.14■■□□□ 1.78
HMGA2-208ENST00000537429 SP7Q8TDD2 431 aaPredicted RBP26.14■■□□□ 1.78
HMGA2-208ENST00000537429 UROC1Q96N76 676 aa26.14■■□□□ 1.78
HMGA2-208ENST00000537429 PAAF1Q9BRP4 392 aa26.14■■□□□ 1.78
HMGA2-208ENST00000537429 IFNKQ9P0W0 207 aa26.14■■□□□ 1.78
HMGA2-208ENST00000537429 GOLGA6L3A6NEY3 463 aa26.14■■□□□ 1.77
HMGA2-208ENST00000537429 GRXCR1A8MXD5 290 aa26.14■■□□□ 1.77
HMGA2-208ENST00000537429 POLR2BP30876 1174 aaKnown RBP26.14■■□□□ 1.77
HMGA2-208ENST00000537429 RBP5P82980 135 aa26.14■■□□□ 1.77
HMGA2-208ENST00000537429 CETN1Q12798 172 aa26.14■■□□□ 1.77
HMGA2-208ENST00000537429 NCOA4Q13772 614 aa26.14■■□□□ 1.77
HMGA2-208ENST00000537429 UPP1Q16831 310 aa26.14■■□□□ 1.77
HMGA2-208ENST00000537429 EPC2Q52LR7 807 aa26.14■■□□□ 1.77
HMGA2-208ENST00000537429 SPOUT1Q5T280 376 aaKnown RBP26.14■■□□□ 1.77
HMGA2-208ENST00000537429 DDX27Q96GQ7 796 aaKnown RBP26.14■■□□□ 1.77
HMGA2-208ENST00000537429 RAB20Q9NX57 234 aa26.14■■□□□ 1.77
HMGA2-208ENST00000537429 AGAP1Q9UPQ3 857 aa26.14■■□□□ 1.77
HMGA2-208ENST00000537429 TEX33O43247 280 aa26.13■■□□□ 1.77
HMGA2-208ENST00000537429 HLA-DRAP01903 254 aa26.13■■□□□ 1.77
HMGA2-208ENST00000537429 KRT19P08727 400 aa26.13■■□□□ 1.77
HMGA2-208ENST00000537429 PLCB2Q00722 1185 aa26.13■■□□□ 1.77
HMGA2-208ENST00000537429 UBXN1Q04323 297 aa26.13■■□□□ 1.77
HMGA2-208ENST00000537429 FKBP15Q5T1M5 1219 aa26.13■■□□□ 1.77
HMGA2-208ENST00000537429 SEMA4DQ92854 862 aa26.13■■□□□ 1.77
HMGA2-208ENST00000537429 TMEM175Q9BSA9 504 aa26.13■■□□□ 1.77
HMGA2-208ENST00000537429 MRPL42Q9Y6G3 142 aaKnown RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms