RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 MALLQ13021 153 aa7.14□□□□□ -1.27
CCDC7-208ENST00000537047 STAT4Q14765 748 aa7.14□□□□□ -1.27
CCDC7-208ENST00000537047 FAM43AQ8N2R8 423 aa7.14□□□□□ -1.27
CCDC7-208ENST00000537047 PDLIM2Q96JY6 352 aa7.14□□□□□ -1.27
CCDC7-208ENST00000537047 SLC2A13Q96QE2 648 aa7.14□□□□□ -1.27
CCDC7-208ENST00000537047 ADI1Q9BV57 179 aa7.14□□□□□ -1.27
CCDC7-208ENST00000537047 KLK15Q9H2R5 256 aa7.14□□□□□ -1.27
CCDC7-208ENST00000537047 GSTO2Q9H4Y5 243 aa7.14□□□□□ -1.27
CCDC7-208ENST00000537047 SEMA4GQ9NTN9 838 aa7.14□□□□□ -1.27
CCDC7-208ENST00000537047 MTO1Q9Y2Z2 717 aaKnown RBP7.14□□□□□ -1.27
CCDC7-208ENST00000537047 CDHR4A6H8M9 788 aa7.13□□□□□ -1.27
CCDC7-208ENST00000537047 RBMXL2O75526 392 aaKnown RBP7.13□□□□□ -1.27
CCDC7-208ENST00000537047 C1RP00736 705 aa7.13□□□□□ -1.27
CCDC7-208ENST00000537047 CKBP12277 381 aa7.13□□□□□ -1.27
CCDC7-208ENST00000537047 MRPS35P82673 323 aaKnown RBP7.13□□□□□ -1.27
CCDC7-208ENST00000537047 SEM1Q6ZVN7 128 aa7.13□□□□□ -1.27
CCDC7-208ENST00000537047 ACTRT2Q8TDY3 377 aa7.13□□□□□ -1.27
CCDC7-208ENST00000537047 CCM2LQ9NUG4 571 aaPredicted RBP7.13□□□□□ -1.27
CCDC7-208ENST00000537047 DNAJC28Q9NX36 388 aa7.13□□□□□ -1.27
CCDC7-208ENST00000537047 FAM30AQ9NZY2 134 aa7.13□□□□□ -1.27
CCDC7-208ENST00000537047 LRIT1Q9P2V4 623 aa7.13□□□□□ -1.27
CCDC7-208ENST00000537047 MTHFD2P13995 350 aa7.12□□□□□ -1.27
CCDC7-208ENST00000537047 VAV2P52735 878 aa7.12□□□□□ -1.27
CCDC7-208ENST00000537047 SLFN5Q08AF3 891 aa7.12□□□□□ -1.27
CCDC7-208ENST00000537047 MTM1Q13496 603 aa7.12□□□□□ -1.27
CCDC7-208ENST00000537047 FAM180AQ6UWF9 173 aa7.12□□□□□ -1.27
CCDC7-208ENST00000537047 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.12□□□□□ -1.27
CCDC7-208ENST00000537047 AFAP1L2Q8N4X5 818 aa7.12□□□□□ -1.27
CCDC7-208ENST00000537047 DPF2Q92785 391 aa7.12□□□□□ -1.27
CCDC7-208ENST00000537047 TMEM140Q9NV12 185 aa7.12□□□□□ -1.27
CCDC7-208ENST00000537047 ASB6Q9NWX5 421 aa7.12□□□□□ -1.27
CCDC7-208ENST00000537047 KCTD5Q9NXV2 234 aa7.12□□□□□ -1.27
CCDC7-208ENST00000537047 VSX1Q9NZR4 365 aaPredicted RBP7.12□□□□□ -1.27
CCDC7-208ENST00000537047 DNM3Q9UQ16 869 aa7.12□□□□□ -1.27
CCDC7-208ENST00000537047 GPR32O75388 356 aa7.11□□□□□ -1.27
CCDC7-208ENST00000537047 ERN1O75460 977 aaKnown RBP7.11□□□□□ -1.27
CCDC7-208ENST00000537047 PRKD3O94806 890 aa7.11□□□□□ -1.27
CCDC7-208ENST00000537047 CACNA2D1P54289 1103 aa7.11□□□□□ -1.27
CCDC7-208ENST00000537047 MGAT2Q10469 447 aa7.11□□□□□ -1.27
CCDC7-208ENST00000537047 ANO4Q32M45 955 aa7.11□□□□□ -1.27
CCDC7-208ENST00000537047 FOXR2Q6PJQ5 311 aa7.11□□□□□ -1.27
CCDC7-208ENST00000537047 Q8NA96 180 aa7.11□□□□□ -1.27
CCDC7-208ENST00000537047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCDC7-208ENST00000537047 SSH3Q8TE77 659 aa7.11□□□□□ -1.27
CCDC7-208ENST00000537047 CASKIN2Q8WXE0 1202 aa7.11□□□□□ -1.27
CCDC7-208ENST00000537047 NELL1Q92832 810 aa7.11□□□□□ -1.27
CCDC7-208ENST00000537047 RAB24Q969Q5 203 aa7.11□□□□□ -1.27
CCDC7-208ENST00000537047 CAAP1Q9H8G2 361 aa7.11□□□□□ -1.27
CCDC7-208ENST00000537047 CDK4P11802 303 aa7.1□□□□□ -1.27
CCDC7-208ENST00000537047 FCER1AP12319 257 aa7.1□□□□□ -1.27
CCDC7-208ENST00000537047 MTNR1BP49286 362 aa7.1□□□□□ -1.27
CCDC7-208ENST00000537047 PAPD7Q5XG87 772 aaKnown RBP7.1□□□□□ -1.27
CCDC7-208ENST00000537047 COG1Q8WTW3 980 aa7.1□□□□□ -1.27
CCDC7-208ENST00000537047 AHCYL2Q96HN2 611 aaKnown RBP7.1□□□□□ -1.27
CCDC7-208ENST00000537047 ZBTB21Q9ULJ3 1066 aa7.1□□□□□ -1.27
CCDC7-208ENST00000537047 MYADML2A6NDP7 307 aa7.09□□□□□ -1.27
CCDC7-208ENST00000537047 KIAA0391O15091 583 aaKnown RBP7.09□□□□□ -1.27
CCDC7-208ENST00000537047 ENDOD1O94919 500 aa7.09□□□□□ -1.27
CCDC7-208ENST00000537047 EYA4O95677 639 aa7.09□□□□□ -1.27
CCDC7-208ENST00000537047 SLC6A4P31645 630 aa7.09□□□□□ -1.27
CCDC7-208ENST00000537047 ATP8B2P98198 1209 aa7.09□□□□□ -1.27
CCDC7-208ENST00000537047 FOXF2Q12947 444 aa7.09□□□□□ -1.27
CCDC7-208ENST00000537047 SF3B3Q15393 1217 aaKnown RBP7.09□□□□□ -1.27
CCDC7-208ENST00000537047 LNX2Q8N448 690 aa7.09□□□□□ -1.27
CCDC7-208ENST00000537047 FITM2Q8N6M3 262 aa7.09□□□□□ -1.27
CCDC7-208ENST00000537047 DCBLD1Q8N8Z6 715 aa7.09□□□□□ -1.27
CCDC7-208ENST00000537047 TBC1D15Q8TC07 691 aa7.09□□□□□ -1.27
CCDC7-208ENST00000537047 MYBBP1AQ9BQG0 1328 aaKnown RBP7.08□□□□□ -1.28
CCDC7-208ENST00000537047 SETD1BQ9UPS6 1966 aaKnown RBP7.08□□□□□ -1.28
CCDC7-208ENST00000537047 BRINP1O60477 761 aa7.08□□□□□ -1.28
CCDC7-208ENST00000537047 DDCP20711 480 aa7.08□□□□□ -1.28
CCDC7-208ENST00000537047 PROK1P58294 105 aa7.08□□□□□ -1.28
CCDC7-208ENST00000537047 NHLH1Q02575 133 aa7.08□□□□□ -1.28
CCDC7-208ENST00000537047 TLR10Q9BXR5 811 aa7.08□□□□□ -1.28
CCDC7-208ENST00000537047 COL3A1P02461 1466 aaPredicted RBP7.07□□□□□ -1.28
CCDC7-208ENST00000537047 SOX5P35711 763 aa7.07□□□□□ -1.28
CCDC7-208ENST00000537047 MASP1P48740 699 aa7.07□□□□□ -1.28
CCDC7-208ENST00000537047 SRRM1Q8IYB3 904 aaKnown RBP7.07□□□□□ -1.28
CCDC7-208ENST00000537047 PPM1NQ8N819 430 aa7.07□□□□□ -1.28
CCDC7-208ENST00000537047 NUP133Q8WUM0 1156 aa7.07□□□□□ -1.28
CCDC7-208ENST00000537047 CHAC2Q8WUX2 184 aa7.07□□□□□ -1.28
CCDC7-208ENST00000537047 PNKPQ96T60 521 aa7.07□□□□□ -1.28
CCDC7-208ENST00000537047 FAM126AQ9BYI3 521 aaPredicted RBP7.07□□□□□ -1.28
CCDC7-208ENST00000537047 TRGV11A0A075B6L2 103 aa7.06□□□□□ -1.28
CCDC7-208ENST00000537047 SBK3P0C264 359 aa7.06□□□□□ -1.28
CCDC7-208ENST00000537047 GJC2Q5T442 439 aaPredicted RBP7.06□□□□□ -1.28
CCDC7-208ENST00000537047 TSHZ1Q6ZSZ6 1077 aa7.06□□□□□ -1.28
CCDC7-208ENST00000537047 COLGALT2Q8IYK4 626 aa7.06□□□□□ -1.28
CCDC7-208ENST00000537047 DMTF1Q9Y222 760 aa7.06□□□□□ -1.28
CCDC7-208ENST00000537047 CGB1A6NKQ9 187 aa7.05□□□□□ -1.28
CCDC7-208ENST00000537047 TEX33O43247 280 aa7.05□□□□□ -1.28
CCDC7-208ENST00000537047 PEX1O43933 1283 aa7.05□□□□□ -1.28
CCDC7-208ENST00000537047 ELFN1P0C7U0 828 aa7.05□□□□□ -1.28
CCDC7-208ENST00000537047 SLC5A3P53794 718 aa7.05□□□□□ -1.28
CCDC7-208ENST00000537047 SH2D3CQ8N5H7 860 aa7.05□□□□□ -1.28
CCDC7-208ENST00000537047 NRG4Q8WWG1 115 aa7.05□□□□□ -1.28
CCDC7-208ENST00000537047 TMEM125Q96AQ2 219 aa7.05□□□□□ -1.28
CCDC7-208ENST00000537047 SLC17A6Q9P2U8 582 aa7.05□□□□□ -1.28
CCDC7-208ENST00000537047 GPR45Q9Y5Y3 372 aa7.05□□□□□ -1.28
CCDC7-208ENST00000537047 ALAS1P13196 640 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms