RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 SMOC2Q9H3U7 446 aa16.31■□□□□ 0.2
UBC-204ENST00000536661 WDR6Q9NNW5 1121 aaKnown RBP16.31■□□□□ 0.2
UBC-204ENST00000536661 LIMD1Q9UGP4 676 aa16.31■□□□□ 0.2
UBC-204ENST00000536661 NOTCH4Q99466 2003 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 TTC26A0AVF1 554 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 MYMKA6NI61 221 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 OGTO15294 1046 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 TRAPPC3O43617 180 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 N4BP1O75113 896 aaKnown RBP16.3■□□□□ 0.2
UBC-204ENST00000536661 CLTAP09496 248 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 RPL9P32969 192 aaKnown RBP16.3■□□□□ 0.2
UBC-204ENST00000536661 OR1D2P34982 312 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 MTMR3Q13615 1198 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 RAB33AQ14088 237 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 STK38Q15208 465 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 ZC2HC1CQ53FD0 456 aaPredicted RBP16.3■□□□□ 0.2
UBC-204ENST00000536661 DDX12PQ92771 950 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 ACSF2Q96CM8 615 aaPredicted RBP16.3■□□□□ 0.2
UBC-204ENST00000536661 PRKD2Q9BZL6 878 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 PIDD1Q9HB75 910 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 CDY1Q9Y6F8 540 aa16.3■□□□□ 0.2
UBC-204ENST00000536661 TCHHQ07283 1943 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 A0A0B4J269 797 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 TISP43B9A030 160 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 C8AP07357 584 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 STAT6P42226 847 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 PPP2R3AQ06190 1150 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 ENOX2Q16206 610 aaKnown RBP16.29■□□□□ 0.2
UBC-204ENST00000536661 LIN9Q5TKA1 542 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 FOXD4L5Q5VV16 416 aaPredicted RBP16.29■□□□□ 0.2
UBC-204ENST00000536661 CCDC73Q6ZRK6 1079 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 ANKS3Q6ZW76 656 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 SV2BQ7L1I2 683 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 LINC00301Q8NCQ3 95 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 FOXD4L4Q8WXT5 416 aaPredicted RBP16.29■□□□□ 0.2
UBC-204ENST00000536661 PBXIP1Q96AQ6 731 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 DNAJC19Q96DA6 116 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 MFSD14AQ96MC6 490 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 MSTO1Q9BUK6 570 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 ST6GALNAC4Q9H4F1 302 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 PLEKHA5Q9HAU0 1116 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 NUB1Q9Y5A7 615 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 BACE2Q9Y5Z0 518 aa16.29■□□□□ 0.2
UBC-204ENST00000536661 LACTBL1A8MY62 500 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 ANKRD63C9JTQ0 380 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 PPP1R37O75864 691 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 ABCD1P33897 745 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 ZBTB6Q15916 424 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 PPM1LQ5SGD2 360 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 VARS2Q5ST30 1063 aaKnown RBP16.28■□□□□ 0.2
UBC-204ENST00000536661 IER5LQ5T953 404 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 GET4Q7L5D6 327 aaPredicted RBP16.28■□□□□ 0.2
UBC-204ENST00000536661 UBALD2Q8IYN6 164 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 STAMQ92783 540 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 KIF12Q96FN5 646 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 MYADMQ96S97 322 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 PANK2Q9BZ23 570 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 IKZF4Q9H2S9 585 aa16.28■□□□□ 0.2
UBC-204ENST00000536661 RPF1Q9H9Y2 349 aaKnown RBP16.28■□□□□ 0.2
UBC-204ENST00000536661 TFIP11Q9UBB9 837 aaKnown RBP16.28■□□□□ 0.2
UBC-204ENST00000536661 SYN3O14994 580 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 SPTLC2O15270 562 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 CCL16O15467 120 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 HSP90AA1P07900 732 aaKnown RBP16.27■□□□□ 0.2
UBC-204ENST00000536661 LRPAP1P30533 357 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 HOXA9P31269 272 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 GBP2P32456 591 aaPredicted RBP16.27■□□□□ 0.2
UBC-204ENST00000536661 MCM4P33991 863 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 GUCY2FP51841 1108 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 KYAT1Q16773 422 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 AXDND1Q5T1B0 1012 aaPredicted RBP16.27■□□□□ 0.2
UBC-204ENST00000536661 ZNF720Q7Z2F6 126 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 FBXL6Q8N531 539 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 PDILTQ8N807 584 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 SLC7A14Q8TBB6 771 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 HVCN1Q96D96 273 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 SUSD3Q96L08 255 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 ZNF396Q96N95 335 aaPredicted RBP16.27■□□□□ 0.2
UBC-204ENST00000536661 TBC1D7Q9P0N9 293 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 SEL1LQ9UBV2 794 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 CPSF3Q9UKF6 684 aaKnown RBP16.27■□□□□ 0.2
UBC-204ENST00000536661 UBQLN1Q9UMX0 589 aaKnown RBP16.27■□□□□ 0.2
UBC-204ENST00000536661 SCN1AP35498 2009 aa16.27■□□□□ 0.2
UBC-204ENST00000536661 ZDBF2Q9HCK1 2354 aa16.26■□□□□ 0.19
UBC-204ENST00000536661 TBC1D4O60343 1298 aa16.26■□□□□ 0.19
UBC-204ENST00000536661 PPP6R2O75170 966 aa16.26■□□□□ 0.19
UBC-204ENST00000536661 YEATS4O95619 227 aa16.26■□□□□ 0.19
UBC-204ENST00000536661 PDGFBP01127 241 aaPredicted RBP16.26■□□□□ 0.19
UBC-204ENST00000536661 ADRB2P07550 413 aa16.26■□□□□ 0.19
UBC-204ENST00000536661 HNRNPA1P09651 372 aaKnown RBP eCLIP16.26■□□□□ 0.19
UBC-204ENST00000536661 ZSCAN22P10073 491 aaPredicted RBP16.26■□□□□ 0.19
UBC-204ENST00000536661 GAP43P17677 238 aa16.26■□□□□ 0.19
UBC-204ENST00000536661 NTHL1P78549 312 aa16.26■□□□□ 0.19
UBC-204ENST00000536661 ROR1Q01973 937 aa16.26■□□□□ 0.19
UBC-204ENST00000536661 FOXD4L6Q3SYB3 417 aaPredicted RBP16.26■□□□□ 0.19
UBC-204ENST00000536661 SLC8B1Q6J4K2 584 aa16.26■□□□□ 0.19
UBC-204ENST00000536661 FOXD4L3Q6VB84 417 aaPredicted RBP16.26■□□□□ 0.19
UBC-204ENST00000536661 GRASPQ7Z6J2 395 aaPredicted RBP16.26■□□□□ 0.19
UBC-204ENST00000536661 SUGP1Q8IWZ8 645 aaKnown RBP16.26■□□□□ 0.19
UBC-204ENST00000536661 STRA6Q9BX79 667 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms