RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 CCDC113Q9H0I3 377 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 DPH5Q9H2P9 285 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 UTP11Q9Y3A2 253 aaKnown RBP14.31□□□□□ -0.12
VPS33B-202ENST00000535906 NUB1Q9Y5A7 615 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 GOLGA6L10A0A0M3HER8 536 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 CTNNA1P35221 906 aaKnown RBP14.3□□□□□ -0.12
VPS33B-202ENST00000535906 CCDC62Q6P9F0 684 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 ZPBP2Q6X784 338 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 MCOLN2Q8IZK6 566 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 RNF149Q8NC42 400 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 CYFIP2Q96F07 1278 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 SPATA33Q96N06 139 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 MPHOSPH6Q99547 160 aaKnown RBP14.3□□□□□ -0.12
VPS33B-202ENST00000535906 TRIM31Q9BZY9 425 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 TRIM7Q9C029 511 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 PCDHA3Q9Y5H8 950 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 IGKV6-21A0A0C4DH24 114 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 CST3P01034 146 aaPredicted RBP14.3□□□□□ -0.12
VPS33B-202ENST00000535906 NR1D1P20393 614 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 CCT5P48643 541 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 EFNA5P52803 228 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 CORO7P57737 925 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 NOP14P78316 857 aaKnown RBP14.3□□□□□ -0.12
VPS33B-202ENST00000535906 DR1Q01658 176 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 PLCB4Q15147 1175 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 CEP85LQ5SZL2 805 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 CDCA2Q69YH5 1023 aaPredicted RBP14.3□□□□□ -0.12
VPS33B-202ENST00000535906 TTC19Q6DKK2 380 aaPredicted RBP14.3□□□□□ -0.12
VPS33B-202ENST00000535906 LLGL2Q6P1M3 1020 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 KCNV1Q6PIU1 500 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 TMEM270Q6UE05 265 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 PHLDB2Q86SQ0 1253 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 ZNF677Q86XU0 584 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 DHX37Q8IY37 1157 aaKnown RBP14.3□□□□□ -0.12
VPS33B-202ENST00000535906 PRELID2Q8N945 189 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 ATP8B4Q8TF62 1192 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 TRAPPC12Q8WVT3 735 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 TCHPQ9BT92 498 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 TMBIM4Q9HC24 238 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 PDGFCQ9NRA1 345 aa14.3□□□□□ -0.12
VPS33B-202ENST00000535906 TCRBV7S2A1N4TA0A589 114 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 H0YGN5 161 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 TOM1L1O75674 476 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 CYP1A1P04798 512 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-202ENST00000535906 GJB1P08034 283 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 RRM1P23921 792 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 SSTR3P32745 418 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-202ENST00000535906 GJA5P36382 358 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 ATP1A2P50993 1020 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 BPIFB4P59827 614 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 SLC20A2Q08357 652 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 PDCLQ13371 301 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 NCOA4Q13772 614 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 CLUL1Q15846 466 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 UAP1Q16222 522 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-202ENST00000535906 PPP2R5EQ16537 467 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 PLPPR4Q7Z2D5 763 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 C18orf8Q96DM3 657 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 ZBTB10Q96DT7 871 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 ZNF668Q96K58 619 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-202ENST00000535906 ACO2Q99798 780 aaKnown RBP14.29□□□□□ -0.12
VPS33B-202ENST00000535906 MRPL4Q9BYD3 311 aaKnown RBP14.29□□□□□ -0.12
VPS33B-202ENST00000535906 FAM114A2Q9NRY5 505 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 ANAPC7Q9UJX3 599 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 PCDHB4Q9Y5E5 795 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 NFS1Q9Y697 457 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 MROH7Q68CQ1 1323 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 GOLGA6L10A6NI86 522 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 EBAG9O00559 213 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 CLTAP09496 248 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 OSBPP22059 807 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 EPHX2P34913 555 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 MTMR3Q13615 1198 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 MXD4Q14582 209 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-202ENST00000535906 SKIDA1Q1XH10 827 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 USP50Q70EL3 339 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-202ENST00000535906 FASTKD5Q7L8L6 764 aaKnown RBP14.29□□□□□ -0.12
VPS33B-202ENST00000535906 BRSK2Q8IWQ3 736 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 PPME1Q9Y570 386 aa14.29□□□□□ -0.12
VPS33B-202ENST00000535906 PRKCBP05771 671 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 TXNP10599 105 aaKnown RBP14.28□□□□□ -0.12
VPS33B-202ENST00000535906 CTNNA2P26232 953 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 MAPK4P31152 587 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 CENPCQ03188 943 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 SEL1L2Q5TEA6 688 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 DUPD1Q68J44 220 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 RHPN2Q8IUC4 686 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 PASD1Q8IV76 773 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 TCP11Q8WWU5 503 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 ERP44Q9BS26 406 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 SYT17Q9BSW7 474 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 FAM107BQ9H098 131 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 EFCC1Q9HA90 598 aa14.28□□□□□ -0.12
VPS33B-202ENST00000535906 ABLIM1O14639 778 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 ZEB2O60315 1214 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 PHF2O75151 1096 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 MYZAPP0CAP1 466 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 CYP2C8P10632 490 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 GNA15P30679 374 aa14.27□□□□□ -0.12
VPS33B-202ENST00000535906 MAGEA9P43362 315 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms