RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 DACT2Q5SW24 774 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 LAIR1Q6GTX8 287 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 TTC7BQ86TV6 843 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 KAT5Q92993 513 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 CHMP4CQ96CF2 233 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 KLHL11Q9NVR0 708 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 MAP3K2Q9Y2U5 619 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 LUC7L2Q9Y383 392 aaKnown RBP6.7□□□□□ -1.34
PRKDC-205ENST00000535375 HS3ST4Q9Y661 456 aa6.7□□□□□ -1.34
PRKDC-205ENST00000535375 CFAP20Q9Y6A4 193 aaKnown RBP6.7□□□□□ -1.34
PRKDC-205ENST00000535375 CENPVL1A0A0U1RR11 272 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 LPXNO60711 386 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 DTNBO60941 627 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 IL33O95760 270 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 GCSHP23434 173 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 EDNRBP24530 442 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 FSTL1Q12841 308 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 MRGPRGQ86SM5 289 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 VRK3Q8IV63 474 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 RPUSD2Q8IZ73 545 aaKnown RBP6.69□□□□□ -1.34
PRKDC-205ENST00000535375 LCORLQ8N3X6 602 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 TBC1D15Q8TC07 691 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 IFI44Q8TCB0 444 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 CHFRQ96EP1 664 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 SERPINB13Q9UIV8 391 aa6.69□□□□□ -1.34
PRKDC-205ENST00000535375 MTO1Q9Y2Z2 717 aaKnown RBP6.69□□□□□ -1.34
PRKDC-205ENST00000535375 A0A087X1B8 175 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 CDHR4A6H8M9 788 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 GRM6O15303 877 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 B3GALT2O43825 422 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 ERN1O75460 977 aaKnown RBP6.68□□□□□ -1.34
PRKDC-205ENST00000535375 HAUS5O94927 633 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 GPANK1O95872 356 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 CFIP05156 583 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 PABPC1LQ4VXU2 614 aaKnown RBP6.68□□□□□ -1.34
PRKDC-205ENST00000535375 ARHGEF19Q8IW93 802 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 TMEM132CQ8N3T6 1108 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 AOPEPQ8N6M6 819 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 RNF31Q96EP0 1072 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 ZSWIM1Q9BR11 485 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 PACSIN1Q9BY11 444 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 ALOXE3Q9BYJ1 711 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 SERHL2Q9H4I8 314 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 TYW1Q9NV66 732 aaKnown RBP6.68□□□□□ -1.34
PRKDC-205ENST00000535375 CALCOCO1Q9P1Z2 691 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 PCDHB1Q9Y5F3 818 aa6.68□□□□□ -1.34
PRKDC-205ENST00000535375 UNC119BA6NIH7 251 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 CDKL5O76039 1030 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 FOSP01100 380 aaPredicted RBP6.67□□□□□ -1.34
PRKDC-205ENST00000535375 FGFR4P22455 802 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 SMARCA1P28370 1054 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 NEK2P51955 445 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 USP14P54578 494 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 HSD11B2P80365 405 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 LDLRAD3Q86YD5 345 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 CPA6Q8N4T0 437 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 NUP133Q8WUM0 1156 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 MARS2Q96GW9 593 aaKnown RBP6.67□□□□□ -1.34
PRKDC-205ENST00000535375 PNKPQ96T60 521 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 WDR11Q9BZH6 1224 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 DDX56Q9NY93 547 aaKnown RBP6.67□□□□□ -1.34
PRKDC-205ENST00000535375 AATKQ6ZMQ8 1374 aa6.67□□□□□ -1.34
PRKDC-205ENST00000535375 FOXN1O15353 648 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 PRSS23O95084 383 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 CT47B1P0C2W7 299 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-205ENST00000535375 VCAM1P19320 739 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 ZNF280AP59817 542 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-205ENST00000535375 TAP1Q03518 808 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 OCA2Q04671 838 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 TP53BP2Q13625 1128 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 THEMIS2Q5TEJ8 643 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 CMTR2Q8IYT2 770 aaKnown RBP6.66□□□□□ -1.34
PRKDC-205ENST00000535375 FAM43AQ8N2R8 423 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 SUPT20HQ8NEM7 779 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 IL17RDQ8NFM7 739 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 HSPBAP1Q96EW2 488 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 MRGPRX4Q96LA9 322 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 IKZF4Q9H2S9 585 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 TESQ9UGI8 421 aaKnown RBP6.66□□□□□ -1.34
PRKDC-205ENST00000535375 USP25Q9UHP3 1055 aa6.66□□□□□ -1.34
PRKDC-205ENST00000535375 LOC105371045A0A1W2PR82 267 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 SUV39H1O43463 412 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 RHOBTB3O94955 611 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 ZRANB2O95218 330 aaKnown RBP eCLIP6.65□□□□□ -1.34
PRKDC-205ENST00000535375 CD1AP06126 327 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 PDGFRBP09619 1106 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 PDCP20941 246 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 ZEB1P37275 1124 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-205ENST00000535375 AVPR1BP47901 424 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 NOMO3P69849 1222 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 KHDC1Q4VXA5 237 aaKnown RBP6.65□□□□□ -1.34
PRKDC-205ENST00000535375 NOMO2Q5JPE7 1267 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 TMEM240Q5SV17 173 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 UTP14CQ5TAP6 766 aaKnown RBP6.65□□□□□ -1.34
PRKDC-205ENST00000535375 DCBLD1Q8N8Z6 715 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 NSUN6Q8TEA1 469 aaKnown RBP6.65□□□□□ -1.34
PRKDC-205ENST00000535375 BOD1Q96IK1 185 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 VRK1Q99986 396 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-205ENST00000535375 GALNT9Q9HCQ5 603 aa6.65□□□□□ -1.34
PRKDC-205ENST00000535375 GNL3LQ9NVN8 582 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms