RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ANHXE9PGG2 379 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 H7C4K7 107 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 STK25O00506 426 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 SYN3O14994 580 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 PI15O43692 258 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 TRAK2O60296 914 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 FAM13AO94988 1023 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 KRT18P05783 430 aaKnown RBP9.72□□□□□ -0.85
COPB1-211ENST00000534234 CLTAP09496 248 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 SRFP11831 508 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 NPR3P17342 541 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 PLCG1P19174 1290 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 AOC1P19801 751 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 PDCP20941 246 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 ELF1P32519 619 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 DDIT3P35638 169 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 ARPP19P56211 112 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 SPAG1Q07617 926 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 MCM6Q14566 821 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 VARS2Q5ST30 1063 aaKnown RBP9.72□□□□□ -0.85
COPB1-211ENST00000534234 SLC8B1Q6J4K2 584 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 FGF13Q92913 245 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 HAPLN2Q9GZV7 340 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 ZHX3Q9H4I2 956 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 PLEKHA5Q9HAU0 1116 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 PARVGQ9HBI0 331 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 FAM86C1Q9NVL1 165 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 DNMT3BQ9UBC3 853 aaKnown RBP9.72□□□□□ -0.85
COPB1-211ENST00000534234 CDH7Q9ULB5 785 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 TBX20Q9UMR3 447 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 NUMBLQ9Y6R0 609 aa9.72□□□□□ -0.85
COPB1-211ENST00000534234 TTC26A0AVF1 554 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 HNRNPDLO14979 420 aaKnown RBP9.71□□□□□ -0.85
COPB1-211ENST00000534234 TBC1D4O60343 1298 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 ABLIM3O94929 683 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 POU2F2P09086 479 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 CXCL8P10145 99 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 SCP2P22307 547 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 MARCKSP29966 332 aaPredicted RBP9.71□□□□□ -0.85
COPB1-211ENST00000534234 MCM4P33991 863 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 LIG4P49917 911 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 ZNF131P52739 623 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 ROR1Q01973 937 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 HTR4Q13639 388 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 MRPL58Q14197 206 aaKnown RBP9.71□□□□□ -0.85
COPB1-211ENST00000534234 PABPC1LQ4VXU2 614 aaKnown RBP9.71□□□□□ -0.85
COPB1-211ENST00000534234 CWF19L1Q69YN2 538 aaKnown RBP9.71□□□□□ -0.85
COPB1-211ENST00000534234 PARM1Q6UWI2 310 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 ITFG1Q8TB96 612 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 GPR152Q8TDT2 470 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 RAD54LQ92698 747 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 FGF14Q92915 247 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 KCNN1Q92952 543 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 EPSTI1Q96J88 318 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 SUSD3Q96L08 255 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 RTP3Q9BQQ7 232 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 RPP25Q9BUL9 199 aaKnown RBP9.71□□□□□ -0.85
COPB1-211ENST00000534234 HCFC1R1Q9NWW0 138 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 CLIC4Q9Y696 253 aa9.71□□□□□ -0.85
COPB1-211ENST00000534234 WDR27A2RRH5 827 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 KRBA1A5PL33 1030 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 LACTBL1A8MY62 500 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 K7ENM7 598 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 PRRG1O14668 218 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 TBCAO75347 108 aaKnown RBP9.71□□□□□ -0.86
COPB1-211ENST00000534234 LRG1P02750 347 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 ATF2P15336 505 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 PTPN2P17706 415 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 SYT1P21579 422 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 TNFSF9P41273 254 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 ZBTB6Q15916 424 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 KYAT1Q16773 422 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 CTXN3Q4LDR2 81 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 SPECC1Q5M775 1068 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 USP49Q70CQ1 688 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 TCEAL8Q8IYN2 117 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 APPL2Q8NEU8 664 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 LARP4BQ92615 738 aaKnown RBP9.71□□□□□ -0.86
COPB1-211ENST00000534234 KIF12Q96FN5 646 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 CCSER1Q9C0I3 900 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 CYP4F11Q9HBI6 524 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 TUBGCP4Q9UGJ1 667 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 FBXL5Q9UKA1 691 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 KCNH3Q9ULD8 1083 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 CA14Q9ULX7 337 aa9.71□□□□□ -0.86
COPB1-211ENST00000534234 UBQLN1Q9UMX0 589 aaKnown RBP9.71□□□□□ -0.86
COPB1-211ENST00000534234 MRPS23Q9Y3D9 190 aaKnown RBP9.71□□□□□ -0.86
COPB1-211ENST00000534234 ZNF318Q5VUA4 2279 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 ZDBF2Q9HCK1 2354 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 PIEZO1Q92508 2521 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 A0A0B4J269 797 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 OGTO15294 1046 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 PIGRP01833 764 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 RHOP08100 348 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 CYP3A5P20815 502 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 RFX1P22670 979 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 NMT1P30419 496 aaKnown RBP9.7□□□□□ -0.86
COPB1-211ENST00000534234 LRPAP1P30533 357 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 GPC5P78333 572 aa9.7□□□□□ -0.86
COPB1-211ENST00000534234 GTF2BQ00403 316 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms