RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 C10orf120Q5SQS8 335 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 IZUMO3Q5VZ72 239 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 ACER1Q8TDN7 264 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 SLC26A7Q8TE54 656 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 STARD7Q9NQZ5 370 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.73□□□□□ -1.331e-20■■■■□ 21.3
UBQLN1-206ENST00000533705 RSPH10B2B2RC85 870 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 GPR182O15218 404 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 DCTN3O75935 186 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 RSPH10BP0C881 870 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 KLRK1P26718 216 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 MAP4P27816 1152 aaKnown RBP6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 ACADSBP45954 432 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 DEUP1Q05D60 604 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 PCSK9Q8NBP7 692 aaKnown RBP6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 FBXO41Q8TF61 875 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 OPTNQ96CV9 577 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 L3MBTL3Q96JM7 780 aaPredicted RBP6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 SRPK1Q96SB4 655 aaKnown RBP6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 MAP3K14Q99558 947 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 ZFATQ9P243 1243 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 THEGQ9P2T0 379 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 PCDHGB4Q9UN71 923 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 TRIM33Q9UPN9 1127 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 TRPA1O75762 1119 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 GRAP2O75791 330 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 DNAJC8O75937 253 aaPredicted RBP6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 ICAM1P05362 532 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 MMEP08473 750 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 HIST1H2AGP0C0S8 130 aaPredicted RBP6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 HIST1H2ADP20671 130 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 YY1P25490 414 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 ARSEP51690 589 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 BACE1P56817 501 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 SESN2P58004 480 aaPredicted RBP6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 CXCL9Q07325 125 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 TWF1Q12792 350 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 CYP4A22Q5TCH4 519 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 FAM47EQ6ZV65 393 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 MFN1Q8IWA4 741 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 KCTD17Q8N5Z5 321 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 SLC30A5Q8TAD4 765 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 CPA5Q8WXQ8 436 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 THOC1Q96FV9 657 aaKnown RBP6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 HIST1H2AHQ96KK5 128 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 HIST1H2AJQ99878 128 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 H2AFJQ9BTM1 129 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 TSSK1BQ9BXA7 367 aa6.73□□□□□ -1.33
UBQLN1-206ENST00000533705 PRR23AA6NEV1 266 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 KCNN4O15554 427 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 PSMD3O43242 534 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 HLA-DRAP01903 254 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 KCNA2P16389 499 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 DDX5P17844 614 aaKnown RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 RPA1P27694 616 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 GNL1P36915 607 aaPredicted RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 PNPLA4P41247 253 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 RBBP7Q16576 425 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 NBPF9Q3BBW0 867 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 NBPF12Q5TAG4 269 aaPredicted RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 INTS5Q6P9B9 1019 aaKnown RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 MMS22LQ6ZRQ5 1243 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 DEFB128Q7Z7B8 93 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 CHSY1Q86X52 802 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 RCOR2Q8IZ40 523 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 ATXN7L3BQ96GX2 97 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 SENP7Q9BQF6 1050 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 TEX12Q9BXU0 123 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 MROH8Q9H579 483 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 KLHL11Q9NVR0 708 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 UVRAGQ9P2Y5 699 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 SFMBT1Q9UHJ3 866 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 SLC30A1Q9Y6M5 507 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 MYMKA6NI61 221 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 HNRNPCL2B2RXH8 293 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 GAS2O43903 313 aaKnown RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 HNRNPCL1O60812 293 aaKnown RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 B3GAT3O94766 335 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 CHGBP05060 677 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 TAF6P49848 677 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 CLCN6P51797 869 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 ZC2HC1CQ53FD0 456 aaPredicted RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 SLC7A14Q8TBB6 771 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 FOPNLQ96NB1 174 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 ELAC2Q9BQ52 826 aaKnown RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 TARS2Q9BW92 718 aaKnown RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 ANGPTL2Q9UKU9 493 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 CAPN11Q9UMQ6 739 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 EEF2KO00418 725 aaKnown RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 EXTL3O43909 919 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 WEE2P0C1S8 567 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 PYGBP11216 843 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 SNRPFP62306 86 aaKnown RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 EDRF1Q3B7T1 1238 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 GLRA4Q5JXX5 417 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 TDRD10Q5VZ19 366 aaKnown RBP6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 ANKS3Q6ZW76 656 aa6.72□□□□□ -1.33
UBQLN1-206ENST00000533705 METTL16Q86W50 562 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms