RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 NLRP11P59045 1033 aaKnown RBP11.44□□□□□ -0.58
CHEK1-213ENST00000532449 SNRNP35Q16560 246 aaKnown RBP11.44□□□□□ -0.58
CHEK1-213ENST00000532449 RNF220Q5VTB9 566 aa11.44□□□□□ -0.58
CHEK1-213ENST00000532449 CDC42EP5Q6NZY7 148 aa11.44□□□□□ -0.58
CHEK1-213ENST00000532449 PDIK1LQ8N165 341 aa11.44□□□□□ -0.58
CHEK1-213ENST00000532449 EMC1Q8N766 993 aa11.44□□□□□ -0.58
CHEK1-213ENST00000532449 SMC1BQ8NDV3 1235 aa11.44□□□□□ -0.58
CHEK1-213ENST00000532449 RTFDC1Q9BY42 306 aaPredicted RBP11.44□□□□□ -0.58
CHEK1-213ENST00000532449 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHEK1-213ENST00000532449 SLC12A6Q9UHW9 1150 aa11.44□□□□□ -0.58
CHEK1-213ENST00000532449 ZNF142P52746 1687 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-213ENST00000532449 DDTLA6NHG4 134 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-213ENST00000532449 PPEF1O14829 653 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-213ENST00000532449 RTN2O75298 545 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 GNA15P30679 374 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 NRLP54845 237 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 PCNX4Q63HM2 1172 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 LRRC6Q86X45 466 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 CYP4X1Q8N118 509 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 MCUQ8NE86 351 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 RNF19AQ9NV58 838 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 ZFATQ9P243 1243 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 O00370 1275 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 COPEO14579 308 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 KRT36O76013 467 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 SF3B3Q15393 1217 aaKnown RBP11.43□□□□□ -0.58
CHEK1-213ENST00000532449 CYTH1Q15438 398 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 NMD3Q96D46 503 aaKnown RBP11.43□□□□□ -0.58
CHEK1-213ENST00000532449 KDM4CQ9H3R0 1056 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 POLLQ9UGP5 575 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 A0A1W2PPM1 405 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 INO80B-WBP1J3KQ70 363 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 DCTN3O75935 186 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 FOSP01100 380 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-213ENST00000532449 RARGP13631 454 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 PHBP35232 272 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 RPA3P35244 121 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-213ENST00000532449 FASTKD3Q14CZ7 662 aaKnown RBP11.43□□□□□ -0.58
CHEK1-213ENST00000532449 TMEM259Q4ZIN3 620 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 HACE1Q8IYU2 909 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 GALNT4Q8N4A0 578 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 INO80BQ9C086 356 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-213ENST00000532449 PCMTD2Q9NV79 361 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 ZMYND8Q9ULU4 1186 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-213ENST00000532449 AK5Q9Y6K8 562 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 PITPNM2Q9BZ72 1349 aa11.43□□□□□ -0.58
CHEK1-213ENST00000532449 NOP56O00567 594 aaKnown RBP11.42□□□□□ -0.58
CHEK1-213ENST00000532449 RASSF9O75901 435 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 HSPA6P17066 643 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 MX2P20592 715 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 EFTUD2Q15029 972 aaKnown RBP eCLIP11.42□□□□□ -0.583e-6■■■■■ 41.9
CHEK1-213ENST00000532449 SH2D4BQ5SQS7 431 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 MROH9Q5TGP6 573 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 SWSAP1Q6NVH7 229 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 NME8Q8N427 588 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 CCNYQ8ND76 341 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 ATL2Q8NHH9 583 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 TBC1D16Q8TBP0 767 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 FAF2Q96CS3 445 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 ZNF341Q9BYN7 854 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 WDR11Q9BZH6 1224 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 NINJ2Q9NZG7 142 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 PI4KBQ9UBF8 816 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 NARFQ9UHQ1 456 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 PRR12Q9ULL5 1215 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 NALCNQ8IZF0 1738 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 APRTP07741 180 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 BGNP21810 368 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 SATB1Q01826 763 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 DGKZQ13574 1117 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 KPNB1Q14974 876 aaKnown RBP11.42□□□□□ -0.58
CHEK1-213ENST00000532449 DLGAP5Q15398 846 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 HIF1AQ16665 826 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 CEP55Q53EZ4 464 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 LARGE2Q8N3Y3 721 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 FAM71DQ8N9W8 422 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 CCHCR1Q8TD31 782 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 CNKSR1Q969H4 720 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 FAM81BQ96LP2 452 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 TSSK1BQ9BXA7 367 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 GLT8D2Q9H1C3 349 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 WNT8AQ9H1J5 351 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 VPS11Q9H270 941 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 PAPOLBQ9NRJ5 636 aaKnown RBP11.42□□□□□ -0.58
CHEK1-213ENST00000532449 GABBR1Q9UBS5 961 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 ZMPSTE24O75844 475 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 USP1O94782 785 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 TMEM191BP0C7N4 346 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 SERPINB3P29508 390 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 MSX2P35548 267 aaPredicted RBP11.42□□□□□ -0.58
CHEK1-213ENST00000532449 ABCG1P45844 678 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 TTLL12Q14166 644 aaPredicted RBP11.42□□□□□ -0.58
CHEK1-213ENST00000532449 TFDP1Q14186 410 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 LRRC23Q53EV4 343 aaPredicted RBP11.42□□□□□ -0.58
CHEK1-213ENST00000532449 KRT39Q6A163 491 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 ARHGAP24Q8N264 748 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 FBXL13Q8NEE6 735 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 MORC4Q8TE76 937 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 USP6NLQ92738 828 aa11.42□□□□□ -0.58
CHEK1-213ENST00000532449 NLRP4Q96MN2 994 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms