RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	RXFP1	Q9HBX9	757 aa		18.96	■□□□□ 0.63
CTSB-223	ENST00000532370	USP15	Q9Y4E8	981 aa	Predicted RBP	18.96	■□□□□ 0.63
CTSB-223	ENST00000532370	TMEM189-UBE2V1	I3L0A0	370 aa		18.95	■□□□□ 0.62
CTSB-223	ENST00000532370	SRGAP2B	P0DMP2	458 aa		18.95	■□□□□ 0.62
CTSB-223	ENST00000532370	SMAD2	Q15796	467 aa	Known RBP	18.95	■□□□□ 0.62
CTSB-223	ENST00000532370	JADE1	Q6IE81	842 aa		18.95	■□□□□ 0.62
CTSB-223	ENST00000532370	EPM2AIP1	Q7L775	607 aa	Predicted RBP	18.95	■□□□□ 0.62
CTSB-223	ENST00000532370	GLYCTK	Q8IVS8	523 aa		18.95	■□□□□ 0.62
CTSB-223	ENST00000532370	SAAL1	Q96ER3	474 aa		18.95	■□□□□ 0.62
CTSB-223	ENST00000532370	FAM213A	Q9BRX8	229 aa		18.95	■□□□□ 0.62
CTSB-223	ENST00000532370	SLC39A2	Q9NP94	309 aa		18.95	■□□□□ 0.62
CTSB-223	ENST00000532370	CD320	Q9NPF0	282 aa		18.95	■□□□□ 0.62
CTSB-223	ENST00000532370	SSX2IP	Q9Y2D8	614 aa		18.95	■□□□□ 0.62
CTSB-223	ENST00000532370	PVALEF	A0A1B0GWK0	134 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	GOLGA8IP	A6NC78	632 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	GOLGA8J	A6NMD2	632 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	KLRC4	O43908	158 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	NFIC	P08651	508 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	SPATA31D3	P0C874	917 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	RPL9	P32969	192 aa	Known RBP	18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	POSTN	Q15063	836 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	SPATA31D4	Q6ZUB0	917 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	PALB2	Q86YC2	1186 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	LNX1	Q8TBB1	728 aa	Predicted RBP	18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	SCFD1	Q8WVM8	642 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	PCIF1	Q9H4Z3	704 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	TMEM206	Q9H813	350 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	USP25	Q9UHP3	1055 aa		18.94	■□□□□ 0.62
CTSB-223	ENST00000532370	MYH11	P35749	1972 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	TULP1	O00294	542 aa	Predicted RBP	18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	ADAM12	O43184	909 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	WEE2	P0C1S8	567 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	PRR29	P0C7W0	189 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	FGFR3	P22607	806 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	TKT	P29401	623 aa	Known RBP	18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	WNT7B	P56706	349 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	ELAVL2	Q12926	359 aa	Known RBP	18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	STXBP4	Q6ZWJ1	553 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	PPFIBP1	Q86W92	1011 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	NELFCD	Q8IXH7	590 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	ZNF507	Q8TCN5	953 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	FBXL18	Q96ME1	805 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	CLSTN3	Q9BQT9	956 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	FAM50B	Q9Y247	325 aa		18.93	■□□□□ 0.62
CTSB-223	ENST00000532370	PPEF2	O14830	753 aa		18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	EIF3D	O15371	548 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	ZNF202	O95125	648 aa		18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	ADH1A	P07327	375 aa		18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	HOXB8	P17481	243 aa	Predicted RBP	18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	GART	P22102	1010 aa		18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	ZP2	Q05996	745 aa		18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	KMT5B	Q4FZB7	885 aa		18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	RARS2	Q5T160	578 aa	Known RBP	18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	GPR65	Q8IYL9	337 aa		18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	NOC3L	Q8WTT2	800 aa	Known RBP	18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	PIK3R5	Q8WYR1	880 aa		18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	SUSD6	Q92537	303 aa		18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	FNIP2	Q9P278	1114 aa		18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	UBQLN1	Q9UMX0	589 aa	Known RBP	18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	NUB1	Q9Y5A7	615 aa		18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	TCF20	Q9UGU0	1960 aa	Known RBP	18.92	■□□□□ 0.62
CTSB-223	ENST00000532370	TNFRSF10A	O00220	468 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	TGFB1I1	O43294	461 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	TGM5	O43548	720 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	TRAPPC3	O43617	180 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	CYP3A5	P20815	502 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	LRPAP1	P30533	357 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	STK4	Q13043	487 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	TMEM132D	Q14C87	1099 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	PSMD5	Q16401	504 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	SPATA1	Q5VX52	437 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	ARMCX5	Q6P1M9	558 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	RSPO2	Q6UXX9	243 aa	Predicted RBP	18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	TMC5	Q6UXY8	1006 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	KRBA2	Q6ZNG9	492 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	CD302	Q8IX05	232 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	FAM84A	Q96KN4	292 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	ADAM7	Q9H2U9	754 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	MAN1C1	Q9NR34	630 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	DZANK1	Q9NVP4	752 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	BDP1	A6H8Y1	2624 aa		18.91	■□□□□ 0.62
CTSB-223	ENST00000532370	EXTL3	O43909	919 aa		18.9	■□□□□ 0.62
CTSB-223	ENST00000532370	GLUD1	P00367	558 aa		18.9	■□□□□ 0.62
CTSB-223	ENST00000532370	ADHFE1	Q8IWW8	467 aa		18.9	■□□□□ 0.62
CTSB-223	ENST00000532370	EFCAB13	Q8IY85	973 aa		18.9	■□□□□ 0.62
CTSB-223	ENST00000532370	GJD3	Q8N144	294 aa		18.9	■□□□□ 0.62
CTSB-223	ENST00000532370	KIAA0895	Q8NCT3	520 aa		18.9	■□□□□ 0.62
CTSB-223	ENST00000532370	ASB7	Q9H672	318 aa		18.9	■□□□□ 0.62
CTSB-223	ENST00000532370	AGPAT3	Q9NRZ7	376 aa		18.9	■□□□□ 0.62
CTSB-223	ENST00000532370	EXOC1	Q9NV70	894 aa		18.9	■□□□□ 0.62
CTSB-223	ENST00000532370	TDRD15	B5MCY1	1934 aa	Known RBP	18.9	■□□□□ 0.62
CTSB-223	ENST00000532370	CLIC2	O15247	247 aa		18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	SSTR3	P32745	418 aa	Predicted RBP	18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	MCM4	P33991	863 aa		18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	DPYD	Q12882	1025 aa		18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	CBX2	Q14781	532 aa	Predicted RBP	18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	LILRA6	Q6PI73	481 aa		18.89	■□□□□ 0.61
CTSB-223	ENST00000532370	CBWD2	Q8IUF1	395 aa		18.89	■□□□□ 0.61

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