RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 TRAPPC3O43617 180 aa15.38■□□□□ 0.05
LRRK1-207ENST00000531270 GRAP2O75791 330 aa15.38■□□□□ 0.05
LRRK1-207ENST00000531270 PRDX5P30044 214 aa15.38■□□□□ 0.05
LRRK1-207ENST00000531270 TRAF7Q6Q0C0 670 aa15.38■□□□□ 0.05
LRRK1-207ENST00000531270 CEP95Q96GE4 821 aa15.38■□□□□ 0.05
LRRK1-207ENST00000531270 EIF2AK1Q9BQI3 630 aaKnown RBP15.38■□□□□ 0.05
LRRK1-207ENST00000531270 MRPL1Q9BYD6 325 aaKnown RBP15.38■□□□□ 0.05
LRRK1-207ENST00000531270 PCMTD2Q9NV79 361 aa15.38■□□□□ 0.05
LRRK1-207ENST00000531270 MYOM2P54296 1465 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 TOMM70O94826 608 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 CYP2E1P05181 493 aaPredicted RBP15.37■□□□□ 0.05
LRRK1-207ENST00000531270 TXNP10599 105 aaKnown RBP15.37■□□□□ 0.05
LRRK1-207ENST00000531270 OOSP2Q86WS3 158 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 ADGRF4Q8IZF3 695 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 FBXO2Q9UK22 296 aaPredicted RBP15.37■□□□□ 0.05
LRRK1-207ENST00000531270 RASSF9O75901 435 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 RIN3Q8TB24 985 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 SH2D3AQ9BRG2 576 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 BBS2Q9BXC9 721 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 TCP11X1B4DZS4 312 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 AIM2O14862 343 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 TXNRD1Q16881 649 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 CHSY1Q86X52 802 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 ZNF614Q8N883 585 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 PNKPQ96T60 521 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 TRIM8Q9BZR9 551 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 STAP2Q9UGK3 403 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 A0A1B0GW55 424 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 DUX4L2P0CJ85 424 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 DUX4L3P0CJ86 424 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 DUX4L4P0CJ87 422 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 DUX4L5P0CJ88 424 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 DUX4L6P0CJ89 424 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 DUX4L7P0CJ90 424 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 MCAMP43121 646 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 NUMBP49757 651 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 PFKFB3Q16875 520 aaPredicted RBP15.37■□□□□ 0.05
LRRK1-207ENST00000531270 PROM2Q8N271 834 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 TRABDQ9H4I3 376 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 DUX4Q9UBX2 424 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 EEF2KO00418 725 aaKnown RBP15.37■□□□□ 0.05
LRRK1-207ENST00000531270 ALDH1A2O94788 518 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 CDC16Q13042 620 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 ASZ1Q8WWH4 475 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 GOLPH3LQ9H4A5 285 aa15.37■□□□□ 0.05
LRRK1-207ENST00000531270 PRG3Q9Y2Y8 225 aaPredicted RBP15.37■□□□□ 0.05
LRRK1-207ENST00000531270 C2CD2LO14523 706 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 CD2BP2O95400 341 aaKnown RBP15.36■□□□□ 0.05
LRRK1-207ENST00000531270 PLIN5Q00G26 463 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 P3H1Q32P28 736 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 TBC1D10CQ8IV04 446 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 MXD3Q9BW11 206 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 NFIBO00712 420 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 HOXA7P31268 230 aaPredicted RBP15.36■□□□□ 0.05
LRRK1-207ENST00000531270 TP53BP2Q13625 1128 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.36■□□□□ 0.05
LRRK1-207ENST00000531270 TMEM143Q96AN5 459 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 EME1Q96AY2 570 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 EPC1Q9H2F5 836 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 PLOD1Q02809 727 aaPredicted RBP15.36■□□□□ 0.05
LRRK1-207ENST00000531270 TRADDQ15628 312 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 MAPRE1Q15691 268 aaKnown RBP15.36■□□□□ 0.05
LRRK1-207ENST00000531270 LONP2Q86WA8 852 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 TADA1Q96BN2 335 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 VPS50Q96JG6 964 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 FAM118BQ9BPY3 351 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 GPR63Q9BZJ6 419 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 TAF1DQ9H5J8 278 aaPredicted RBP15.36■□□□□ 0.05
LRRK1-207ENST00000531270 XPO7Q9UIA9 1087 aaKnown RBP15.36■□□□□ 0.05
LRRK1-207ENST00000531270 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
LRRK1-207ENST00000531270 KIF28PB7ZC32 967 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 CHRM3P20309 590 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 MTM1Q13496 603 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 CYB5R4Q7L1T6 521 aa15.36■□□□□ 0.05
LRRK1-207ENST00000531270 APOBEC3FQ8IUX4 373 aaKnown RBP15.36■□□□□ 0.05
LRRK1-207ENST00000531270 C16orf96A6NNT2 1141 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 SNAP23O00161 211 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 MYL2P10916 166 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 SCP2P22307 547 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 LIFRP42702 1097 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 ACOT2P49753 483 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 PHKG1Q16816 387 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 IPMKQ8NFU5 416 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 OPTNQ96CV9 577 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 TSPAN17Q96FV3 270 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 FAM20AQ96MK3 541 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 LINC00854A0A1B0GVQ3 168 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 RNF103O00237 685 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 DYNC1LI2O43237 492 aaPredicted RBP15.35■□□□□ 0.05
LRRK1-207ENST00000531270 PGK2P07205 417 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 MLH1P40692 756 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 PLA2G4AP47712 749 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 CLK1P49759 484 aaKnown RBP15.35■□□□□ 0.05
LRRK1-207ENST00000531270 HMGCS2P54868 508 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 RPS7P62081 194 aaKnown RBP15.35■□□□□ 0.05
LRRK1-207ENST00000531270 SLC44A2Q8IWA5 706 aaPredicted RBP15.35■□□□□ 0.05
LRRK1-207ENST00000531270 MIER2Q8N344 545 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 XPO1O14980 1071 aaKnown RBP15.35■□□□□ 0.05
LRRK1-207ENST00000531270 TDP2O95551 362 aa15.35■□□□□ 0.05
LRRK1-207ENST00000531270 C6orf222P0C671 652 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms