RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 FAM186AA6NE01 2351 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 WDR27A2RRH5 827 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 FAM170BA6NMN3 283 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 LAD1O00515 517 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 KINO60870 393 aaKnown RBP17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 CPB1P15086 417 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 CDC25AP30304 524 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 PDIA5Q14554 519 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 SLC8B1Q6J4K2 584 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 ZNF280DQ6N043 979 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 CD300LGQ6UXG3 332 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 DTHD1Q6ZMT9 781 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 PDZD4Q76G19 769 aaPredicted RBP17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 RTL10Q7L3V2 364 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 TAS1R3Q7RTX0 852 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 DAW1Q8N136 415 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 C4orf32Q8N8J7 132 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 C18orf25Q96B23 403 aaPredicted RBP17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 BICD1Q96G01 975 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 CDK5RAP3Q96JB5 506 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 LTB4R2Q9NPC1 389 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 GDE1Q9NZC3 331 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 CNTN3Q9P232 1028 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 KIF3AQ9Y496 699 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 INSL5Q9Y5Q6 135 aa17.3■□□□□ 0.36
CHMP4A-204ENST00000530996 COL4A3Q01955 1670 aa17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 DMDP11532 3685 aa17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 SFI1A8K8P3 1242 aa17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 SYN3O14994 580 aa17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 ECI2O75521 394 aa17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 KCNE1P15382 129 aa17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 PTPN2P17706 415 aa17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 U2AF2P26368 475 aaKnown RBP eCLIP17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 GRM2Q14416 872 aa17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 ERMP1Q7Z2K6 904 aa17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 ZNF461Q8TAF7 563 aa17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 ZMAT2Q96NC0 199 aaKnown RBP17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 FBXL5Q9UKA1 691 aa17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 MTF2Q9Y483 593 aaPredicted RBP17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 GVINP1Q7Z2Y8 2422 aa17.29■□□□□ 0.36
CHMP4A-204ENST00000530996 VWA8A3KMH1 1905 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 MTCL1Q9Y4B5 1905 aaKnown RBP17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 PRPHP41219 470 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 SMTNP53814 917 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 CSTF1Q05048 431 aaKnown RBP17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 MAPK7Q13164 816 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 SEZ6Q53EL9 994 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 ZBTB41Q5SVQ8 909 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 IQCEQ6IPM2 695 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 RINT1Q6NUQ1 792 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 KCNK18Q7Z418 384 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 APPL2Q8NEU8 664 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 RUBCNQ92622 972 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 PLIN2Q99541 437 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 TIPINQ9BVW5 301 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 SLITRK6Q9H5Y7 841 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 C17orf75Q9HAS0 396 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 PTPRHQ9HD43 1115 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 HEBP1Q9NRV9 189 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 TUBGCP4Q9UGJ1 667 aa17.28■□□□□ 0.36
CHMP4A-204ENST00000530996 ARHGEF37A1IGU5 675 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 ZNF197O14709 1029 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 NCAM2O15394 837 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 TOM1L1O75674 476 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 CXCL8P10145 99 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 PLS3P13797 630 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 ATF2P15336 505 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 TARSP26639 723 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 RPL9P32969 192 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 MAGEA9P43362 315 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 TOB1P50616 345 aaPredicted RBP17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 ADCY1Q08828 1119 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 XKR4Q5GH76 650 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 CYP4A22Q5TCH4 519 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 ALKAL1Q6UXT8 129 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 ZNF852Q6ZMS4 543 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 C1orf186Q6ZWK4 172 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 TCEAL4Q96EI5 215 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 ZBTB45Q96K62 511 aaPredicted RBP17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 DDX23Q9BUQ8 820 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 BRD9Q9H8M2 597 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 NCDNQ9UBB6 729 aa17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 MRPS17Q9Y2R5 130 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-204ENST00000530996 MYH15Q9Y2K3 1946 aa17.27■□□□□ 0.35
CHMP4A-204ENST00000530996 SPTLC1O15269 473 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 ABLIM3O94929 683 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 SEC24AO95486 1093 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 MYL4P12829 197 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 PROZP22891 400 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 GUCY2CP25092 1073 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 MARCKSP29966 332 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 TWF1Q12792 350 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 TPGS2Q68CL5 300 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 TANGO2Q6ICL3 276 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 TCEAL8Q8IYN2 117 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 ATRIPQ8WXE1 791 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 ELSPBP1Q96BH3 223 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 SUSD3Q96L08 255 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms