RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 PLIN1O60240 522 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 PRKD3O94806 890 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 PRLP01236 227 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 CFPP27918 469 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 LSP1P33241 339 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 RBM5P52756 815 aaKnown RBP eCLIP6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 ALDH6A1Q02252 535 aaKnown RBP6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 EPHA7Q15375 998 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 PRR31Q5SQ13 230 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 BEND3Q5T5X7 828 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 LMBR1LQ6UX01 489 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 UNQ6494/PRO21346Q6UXR6 183 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 LDHAL6AQ6ZMR3 332 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 RPUSD2Q8IZ73 545 aaKnown RBP6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 SPATA25Q9BR10 227 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 MYL10Q9BUA6 226 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 TRIM8Q9BZR9 551 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 CNNM1Q9NRU3 951 aa6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 TOPORSQ9NS56 1045 aaPredicted RBP6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 NOC2LQ9Y3T9 749 aaKnown RBP6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 ZNF646O15015 1829 aaPredicted RBP6.26□□□□□ -1.41
AMBRA1-209ENST00000529963 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 A0A1W2PPC1 479 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 SSC5DA1L4H1 1573 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 GRM8O00222 908 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 MARCH6O60337 910 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 KATNA1O75449 491 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 CLEC2LP0C7M8 214 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 COL6A1P12109 1028 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 CD40P25942 277 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 CD83Q01151 205 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 EXOSC9Q06265 439 aaKnown RBP6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 MYBPC3Q14896 1274 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 CCDC184Q52MB2 194 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 TTC38Q5R3I4 469 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 MCTP2Q6DN12 878 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 SLFN12LQ6IEE8 588 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 SPATS2Q86XZ4 545 aaKnown RBP6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 C7orf31Q8N865 590 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 ZNF610Q8N9Z0 462 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 TP53I13Q8NBR0 393 aaPredicted RBP6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 ERO1AQ96HE7 468 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 CLMNQ96JQ2 1002 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 ANO3Q9BYT9 981 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 CCDC8Q9H0W5 538 aaPredicted RBP6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 R3HDMLQ9H3Y0 253 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 SLC5A4Q9NY91 659 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 C9orf78Q9NZ63 289 aaPredicted RBP6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 FZD1Q9UP38 647 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 JAG2Q9Y219 1238 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 TRIM17Q9Y577 477 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 FAM205AQ6ZU69 1335 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 CACNA1FO60840 1977 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 HTTP42858 3142 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 KDM1AO60341 852 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 ALDH1L1O75891 902 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 HIBADHP31937 336 aaKnown RBP6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 GUCY2FP51841 1108 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 PHC1P78364 1004 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 UBE4AQ14139 1066 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 LRRC32Q14392 662 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 NOLC1Q14978 699 aaKnown RBP eCLIP6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 PDCD1Q15116 288 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 EPHA10Q5JZY3 1008 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 MFSD14BQ5SR56 506 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 RNF219Q5W0B1 726 aaPredicted RBP6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 LRRC56Q8IYG6 542 aaPredicted RBP6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 MAML3Q96JK9 1138 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 PRMT6Q96LA8 375 aaPredicted RBP6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 ZDHHC5Q9C0B5 715 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 OR10A5Q9H207 317 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 NTMQ9P121 344 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 CDC42EP3Q9UKI2 254 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 PCDHAC2Q9Y5I4 1007 aa6.25□□□□□ -1.41
AMBRA1-209ENST00000529963 H0YGN5 161 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 ANP32CO43423 234 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 ULK1O75385 1050 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 PRPF6O94906 941 aaKnown RBP6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 KNG1P01042 644 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 ZNF28P17035 718 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 RPL13P26373 211 aaKnown RBP6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 SARSP49591 514 aaKnown RBP6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 SCAND1P57086 179 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 ARHGEF6Q15052 776 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 WDR72Q3MJ13 1102 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 ZBTB41Q5SVQ8 909 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 TCERG1LQ5VWI1 586 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 SLC4A10Q6U841 1118 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 RASSF3Q86WH2 238 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 PHYKPLQ8IUZ5 450 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 ZZZ3Q8IYH5 903 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 CARFQ8N187 725 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 CNTD1Q8N815 330 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 NUDT10Q8NFP7 164 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 TDRD7Q8NHU6 1098 aaKnown RBP6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 WDR48Q8TAF3 677 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 NUDT11Q96G61 164 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 SCYL1Q96KG9 808 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 FOXB1Q99853 325 aa6.24□□□□□ -1.41
AMBRA1-209ENST00000529963 BTBD2Q9BX70 525 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms