RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 C12orf65Q9H3J6 166 aaKnown RBP13.24□□□□□ -0.29
TSKU-203ENST00000527881 LGALS13Q9UHV8 139 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 FOXN3O00409 490 aaPredicted RBP13.24□□□□□ -0.29
TSKU-203ENST00000527881 ADAMTS2O95450 1211 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 ALAS1P13196 640 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 KRT4P19013 534 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 ADRA1DP25100 572 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 PRDX5P30044 214 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 NR1H3Q13133 447 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 CBX3Q13185 183 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 GRK7Q8WTQ7 553 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 PRPF31Q8WWY3 499 aaKnown RBP13.24□□□□□ -0.29
TSKU-203ENST00000527881 AZIN2Q96A70 460 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 ZNF653Q96CK0 615 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 PRR11Q96HE9 360 aaPredicted RBP13.24□□□□□ -0.29
TSKU-203ENST00000527881 NUP85Q9BW27 656 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 KIAA1586Q9HCI6 787 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 GRID1Q9ULK0 1009 aa13.24□□□□□ -0.29
TSKU-203ENST00000527881 PIAS1O75925 651 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 KCNA1Q09470 495 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 CDC16Q13042 620 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 MMEL1Q495T6 779 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 C11orf63Q6NUN7 778 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 RGS9BPQ6ZS82 235 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 TTC7BQ86TV6 843 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 ZNF564Q8TBZ8 553 aaPredicted RBP13.23□□□□□ -0.29
TSKU-203ENST00000527881 RPGRQ92834 1020 aaKnown RBP13.23□□□□□ -0.29
TSKU-203ENST00000527881 CATSPER2Q96P56 530 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 TLE6Q9H808 572 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 UBE2TQ9NPD8 197 aaPredicted RBP13.23□□□□□ -0.29
TSKU-203ENST00000527881 SERPINA10Q9UK55 444 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 NENFQ9UMX5 172 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 ACTL7BQ9Y614 415 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 PLEKHG4Q58EX7 1191 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 OSBPL8Q9BZF1 889 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 INTS2Q9H0H0 1204 aaKnown RBP13.23□□□□□ -0.29
TSKU-203ENST00000527881 GPCPD1Q9NPB8 672 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 ZNF510Q9Y2H8 683 aa13.23□□□□□ -0.29
TSKU-203ENST00000527881 A0A1W2PPM1 405 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 RRM1P23921 792 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 MYL7Q01449 175 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 CYP4A11Q02928 519 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 LMNB2Q03252 620 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 BTKQ06187 659 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 MAPK6Q16659 721 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 TMEM63BQ5T3F8 832 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 DPY19L2Q6NUT2 758 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 KLC3Q6P597 504 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 RIPOR1Q6ZS17 1223 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 MTBPQ96DY7 904 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 HAPLN3Q96S86 360 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 TMEM120AQ9BXJ8 343 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 TFCP2L1Q9NZI6 479 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 ZMYM2Q9UBW7 1377 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 PSMC2P35998 433 aaKnown RBP13.22□□□□□ -0.29
TSKU-203ENST00000527881 FMO5P49326 533 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 CAV1Q03135 178 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 SLC44A4Q53GD3 710 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 LRRC6Q86X45 466 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 SLC5A5Q92911 643 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 REEP2Q9BRK0 252 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 TSSK1BQ9BXA7 367 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 SMYD3Q9H7B4 428 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 PPARGC1AQ9UBK2 798 aaKnown RBP13.22□□□□□ -0.29
TSKU-203ENST00000527881 ZBTB1Q9Y2K1 713 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 RSPH10B2B2RC85 870 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 PDXKO00764 312 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 RSPH10BP0C881 870 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 CCDC166P0CW27 439 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 BCRP11274 1271 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 ATP6V1B1P15313 513 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 RFC4P35249 363 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 CYLC2Q14093 348 aaPredicted RBP13.22□□□□□ -0.29
TSKU-203ENST00000527881 GRAMD1BQ3KR37 738 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 SCUBE1Q8IWY4 988 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 CCDC97Q96F63 343 aaPredicted RBP13.22□□□□□ -0.29
TSKU-203ENST00000527881 YIPF2Q9BWQ6 316 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 DNM3Q9UQ16 869 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 PCDHA2Q9Y5H9 948 aa13.22□□□□□ -0.29
TSKU-203ENST00000527881 A8MXQ7 604 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 MAGEB2O15479 319 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 EIF6P56537 245 aaKnown RBP13.21□□□□□ -0.29
TSKU-203ENST00000527881 DPY19L2P1Q6NXN4 242 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 JDP2Q8WYK2 163 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 TTC17Q96AE7 1141 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 NSUN4Q96CB9 384 aaKnown RBP13.21□□□□□ -0.29
TSKU-203ENST00000527881 SIKE1Q9BRV8 207 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 FRMD4BQ9Y2L6 1034 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 NUMBLQ9Y6R0 609 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 SERPINB6P35237 376 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 HPCAP84074 193 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 RBM44Q6ZP01 1051 aaKnown RBP13.21□□□□□ -0.29
TSKU-203ENST00000527881 SLC26A7Q8TE54 656 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 ZNF384Q8TF68 577 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 LRRC19Q9H756 370 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 APEX2Q9UBZ4 518 aa13.21□□□□□ -0.29
TSKU-203ENST00000527881 FCHO1O14526 889 aa13.21□□□□□ -0.3
TSKU-203ENST00000527881 ASPHQ12797 758 aa13.21□□□□□ -0.3
TSKU-203ENST00000527881 ORC2Q13416 577 aaPredicted RBP13.21□□□□□ -0.3
TSKU-203ENST00000527881 SUSD4Q5VX71 490 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms