RNA–Protein interactions for RNA: ENST00000527446.5

RPS3-209, Transcript of ribosomal protein S3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RPS3, Length 1,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-209ENST00000527446 LRPAP1P30533 357 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 GTF2H1P32780 548 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 TFAMQ00059 246 aaKnown RBP13.79□□□□□ -0.2
RPS3-209ENST00000527446 BTG3Q14201 252 aaPredicted RBP13.79□□□□□ -0.2
RPS3-209ENST00000527446 KRT31Q15323 416 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 ZACNQ401N2 412 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 CD300LGQ6UXG3 332 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 SV2AQ7L0J3 742 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 LRRC43Q8N309 656 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 RNF214Q8ND24 703 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 CLP1Q92989 425 aaKnown RBP13.79□□□□□ -0.2
RPS3-209ENST00000527446 PAAF1Q9BRP4 392 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 MTMR12Q9C0I1 747 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 GOLGA2P5Q9HBQ8 144 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 SLC38A7Q9NVC3 462 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 DPP3Q9NY33 737 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 UBQLN1Q9UMX0 589 aaKnown RBP13.79□□□□□ -0.2
RPS3-209ENST00000527446 COLQQ9Y215 455 aaPredicted RBP13.79□□□□□ -0.2
RPS3-209ENST00000527446 YBX2Q9Y2T7 364 aaKnown RBP13.79□□□□□ -0.2
RPS3-209ENST00000527446 PCDHA11Q9Y5I1 949 aa13.79□□□□□ -0.2
RPS3-209ENST00000527446 ANO9A1A5B4 782 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 PIRO00625 290 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 PPEF2O14830 753 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 PMM2O15305 246 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 VNN1O95497 513 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 PBX2P40425 430 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 GCLMP48507 274 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 AP3M2P53677 418 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 KCNH2Q12809 1159 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 UPP1Q16831 310 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 CBWD6Q4V339 395 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 DCAF17Q5H9S7 520 aaPredicted RBP13.78□□□□□ -0.2
RPS3-209ENST00000527446 CBWD3Q5JTY5 395 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 CBWD5Q5RIA9 395 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 TDRD10Q5VZ19 366 aaKnown RBP13.78□□□□□ -0.2
RPS3-209ENST00000527446 TRAPPC11Q7Z392 1133 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 USP37Q86T82 979 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 CACTINQ8WUQ7 758 aaKnown RBP13.78□□□□□ -0.2
RPS3-209ENST00000527446 TUBGCP2Q9BSJ2 902 aa13.78□□□□□ -0.2
RPS3-209ENST00000527446 MAGEC2Q9UBF1 373 aaPredicted RBP13.78□□□□□ -0.2
RPS3-209ENST00000527446 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.78□□□□□ -0.27e-40■□□□□ 10.1
RPS3-209ENST00000527446 KIAA1671Q9BY89 1806 aa13.77□□□□□ -0.2
RPS3-209ENST00000527446 A0A1W2PPC1 479 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 LINC01553A4QN01 128 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 CASTOR2A6NHX0 329 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 F8W810 466 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 CST3P01034 146 aaPredicted RBP13.77□□□□□ -0.21
RPS3-209ENST00000527446 GALTP07902 379 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 RPL9P32969 192 aaKnown RBP13.77□□□□□ -0.21
RPS3-209ENST00000527446 MTIF2P46199 727 aaKnown RBP13.77□□□□□ -0.21
RPS3-209ENST00000527446 SLC11A1P49279 550 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 FMO5P49326 533 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 CLCNKBP51801 687 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 RNASELQ05823 741 aaKnown RBP13.77□□□□□ -0.21
RPS3-209ENST00000527446 MAN2A1Q16706 1144 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 PRPF38BQ5VTL8 546 aaKnown RBP13.77□□□□□ -0.21
RPS3-209ENST00000527446 C9orf57Q5W0N0 161 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 CREBRFQ8IUR6 639 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 FIBCD1Q8N539 461 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 C3orf58Q8NDZ4 430 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 BEST2Q8NFU1 509 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 RABGGTAQ92696 567 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 TMEM175Q9BSA9 504 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 PBX4Q9BYU1 374 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 TMEM8AQ9HCN3 771 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 TAB2Q9NYJ8 693 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 CHD7Q9P2D1 2997 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 ITGA11Q9UKX5 1188 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 COQ4Q9Y3A0 265 aa13.77□□□□□ -0.21
RPS3-209ENST00000527446 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.77□□□□□ -0.21
RPS3-209ENST00000527446 TULP1O00294 542 aaPredicted RBP13.76□□□□□ -0.21
RPS3-209ENST00000527446 XPOTO43592 962 aaKnown RBP13.76□□□□□ -0.21
RPS3-209ENST00000527446 STX10O60499 249 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 LRRN2O75325 713 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 EFEMP2O95967 443 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 TNNC2P02585 160 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 AFPP02771 609 aaKnown RBP13.76□□□□□ -0.21
RPS3-209ENST00000527446 TMEM191BP0C7N4 346 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 PBX3P40426 434 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 COPB1P53618 953 aaKnown RBP13.76□□□□□ -0.21
RPS3-209ENST00000527446 BCAR1P56945 870 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 LRIT3Q3SXY7 679 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 VWA3BQ502W6 1294 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 TCERG1LQ5VWI1 586 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 KRT39Q6A163 491 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 SPRED2Q7Z698 418 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 LMO3Q8TAP4 145 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 TAS1R2Q8TE23 839 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 BCL7CQ8WUZ0 217 aaPredicted RBP13.76□□□□□ -0.21
RPS3-209ENST00000527446 SEMA4DQ92854 862 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 DDX27Q96GQ7 796 aaKnown RBP13.76□□□□□ -0.21
RPS3-209ENST00000527446 ANKRD36BP1Q96IX9 119 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 UROC1Q96N76 676 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 XYLT2Q9H1B5 865 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 NDST4Q9H3R1 872 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 MARCH5Q9NX47 278 aa13.76□□□□□ -0.21
RPS3-209ENST00000527446 GOLGA6L19H0YKK7 550 aa13.75□□□□□ -0.21
RPS3-209ENST00000527446 TMEM189-UBE2V1I3L0A0 370 aa13.75□□□□□ -0.21
RPS3-209ENST00000527446 PODXLO00592 558 aa13.75□□□□□ -0.21
RPS3-209ENST00000527446 NRP1O14786 923 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms