RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 MTMR12Q9C0I1 747 aa17.86■□□□□ 0.45
CAPN1-205ENST00000526954 DPP3Q9NY33 737 aa17.86■□□□□ 0.45
CAPN1-205ENST00000526954 TUBGCP4Q9UGJ1 667 aa17.86■□□□□ 0.45
CAPN1-205ENST00000526954 LIMA1Q9UHB6 759 aaKnown RBP17.86■□□□□ 0.45
CAPN1-205ENST00000526954 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.86■□□□□ 0.45
CAPN1-205ENST00000526954 MRPL42Q9Y6G3 142 aaKnown RBP17.86■□□□□ 0.45
CAPN1-205ENST00000526954 RANBP2P49792 3224 aaKnown RBP17.85■□□□□ 0.45
CAPN1-205ENST00000526954 ANO9A1A5B4 782 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 LCHNA4D1U4 455 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 GOLGA6L19H0YKK7 550 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 PMM2O15305 246 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 TNNC2P02585 160 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 LINC00271P0C7V0 271 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 TPM4P67936 248 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 SMAD3P84022 425 aaKnown RBP17.85■□□□□ 0.45
CAPN1-205ENST00000526954 KRT31Q15323 416 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 RAB30Q15771 203 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 MAN2A1Q16706 1144 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 ZACNQ401N2 412 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 DCAF17Q5H9S7 520 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-205ENST00000526954 TCERG1LQ5VWI1 586 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 SV2AQ7L0J3 742 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 TRAPPC11Q7Z392 1133 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 GAS2L3Q86XJ1 694 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 CREBRFQ8IUR6 639 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 C1orf127Q8N9H9 656 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 CXorf38Q8TB03 319 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 TUBGCP2Q9BSJ2 902 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 PBX4Q9BYU1 374 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 TMEM8AQ9HCN3 771 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 HCSTQ9UBK5 93 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 DNAJB4Q9UDY4 337 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 ITGA11Q9UKX5 1188 aa17.85■□□□□ 0.45
CAPN1-205ENST00000526954 COLQQ9Y215 455 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-205ENST00000526954 TULP1O00294 542 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-205ENST00000526954 PIRO00625 290 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 ZC3H11AO75152 810 aaKnown RBP eCLIP17.84■□□□□ 0.45
CAPN1-205ENST00000526954 AFPP02771 609 aaKnown RBP17.84■□□□□ 0.45
CAPN1-205ENST00000526954 ALDH2P05091 517 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 GALTP07902 379 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 ATP1A3P13637 1013 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 PRKCSHP14314 528 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-205ENST00000526954 MYOGP15173 224 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 LAG3P18627 525 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 CDK11BP21127 795 aaKnown RBP17.84■□□□□ 0.45
CAPN1-205ENST00000526954 KCNH2Q12809 1159 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 UPP1Q16831 310 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 LRIT3Q3SXY7 679 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 TDRD10Q5VZ19 366 aaKnown RBP17.84■□□□□ 0.45
CAPN1-205ENST00000526954 KRT39Q6A163 491 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 APTXQ7Z2E3 356 aaKnown RBP17.84■□□□□ 0.45
CAPN1-205ENST00000526954 ANKRD20A12PQ8NF67 263 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 FAM84AQ96KN4 292 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 GOLGA2P5Q9HBQ8 144 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 SIX4Q9UIU6 781 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 MSRAQ9UJ68 235 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 YBX2Q9Y2T7 364 aaKnown RBP17.84■□□□□ 0.45
CAPN1-205ENST00000526954 SCN1AP35498 2009 aa17.84■□□□□ 0.45
CAPN1-205ENST00000526954 LINC01553A4QN01 128 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 CASTOR2A6NHX0 329 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 P4HA2O15460 535 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 N4BP1O75113 896 aaKnown RBP17.83■□□□□ 0.44
CAPN1-205ENST00000526954 PBX2P40425 430 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 GCLMP48507 274 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 FMO5P49326 533 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 ALDH7A1P49419 539 aaKnown RBP17.83■□□□□ 0.44
CAPN1-205ENST00000526954 MXI1P50539 228 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 CLCNKBP51801 687 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 GUCY2FP51841 1108 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 BCAR1P56945 870 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 VWA3BQ502W6 1294 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 MIIPQ5JXC2 388 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 C9orf57Q5W0N0 161 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 DCLRE1AQ6PJP8 1040 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 RNF214Q8ND24 703 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 PAAF1Q9BRP4 392 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 RBSNQ9H1K0 784 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 AAASQ9NRG9 546 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 FAN1Q9Y2M0 1017 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 COQ4Q9Y3A0 265 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 RWDD3Q9Y3V2 267 aa17.83■□□□□ 0.44
CAPN1-205ENST00000526954 LAMA2P24043 3122 aaKnown RBP17.83■□□□□ 0.44
CAPN1-205ENST00000526954 TMEM189-UBE2V1I3L0A0 370 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 PODXLO00592 558 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 NRP1O14786 923 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 ITGB3P05106 788 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 CA3P07451 260 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 PAX3P23760 479 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 SLC11A1P49279 550 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 RBP5P82980 135 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 BIRC3Q13489 604 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 CBWD6Q4V339 395 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 CBWD3Q5JTY5 395 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 CBWD5Q5RIA9 395 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 SPOUT1Q5T280 376 aaKnown RBP17.82■□□□□ 0.44
CAPN1-205ENST00000526954 KCNT2Q6UVM3 1135 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 TMEM130Q8N3G9 435 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 COLGALT1Q8NBJ5 622 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 ZNF558Q96NG5 402 aa17.82■□□□□ 0.44
CAPN1-205ENST00000526954 COLEC11Q9BWP8 271 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms