RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 RAB33AQ14088 237 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 ZNF174Q15697 407 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 TPRG1Q6ZUI0 275 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 C3orf58Q8NDZ4 430 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 KIFAP3Q92845 792 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 UROC1Q96N76 676 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 PPP1R9BQ96SB3 815 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 BHMT2Q9H2M3 363 aa12.88□□□□□ -0.35
CAPN1-204ENST00000526468 MRPS23Q9Y3D9 190 aaKnown RBP12.88□□□□□ -0.35
CAPN1-204ENST00000526468 PRRG1O14668 218 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 LAMTOR5O43504 91 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 TRAPPC3O43617 180 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 LRG1P02750 347 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 HARSP12081 509 aaKnown RBP12.87□□□□□ -0.35
CAPN1-204ENST00000526468 CEBPBP17676 345 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 MSNP26038 577 aaKnown RBP12.87□□□□□ -0.35
CAPN1-204ENST00000526468 BRCC3P46736 316 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 OSTNP61366 133 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 ROR1Q01973 937 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 PRKCQQ04759 706 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 DMP1Q13316 513 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-204ENST00000526468 SLC5A9Q2M3M2 681 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 ANKS3Q6ZW76 656 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 ZSCAN30Q86W11 494 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 CCDC83Q8IWF9 413 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 CEP120Q8N960 986 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 SNX29Q8TEQ0 813 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 RMDN1Q96DB5 314 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 CCDC94Q9BW85 323 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-204ENST00000526468 CDT1Q9H211 546 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 POLD4Q9HCU8 107 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 LTB4R2Q9NPC1 389 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 TOPORSQ9NS56 1045 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-204ENST00000526468 KCNH3Q9ULD8 1083 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 NOL7Q9UMY1 257 aaKnown RBP12.87□□□□□ -0.35
CAPN1-204ENST00000526468 EPG5Q9HCE0 2579 aa12.87□□□□□ -0.35
CAPN1-204ENST00000526468 CCDC169A6NNP5 214 aa12.86□□□□□ -0.35
CAPN1-204ENST00000526468 PODXLO00592 558 aa12.86□□□□□ -0.35
CAPN1-204ENST00000526468 RHOP08100 348 aa12.86□□□□□ -0.35
CAPN1-204ENST00000526468 ARPP19P56211 112 aa12.86□□□□□ -0.35
CAPN1-204ENST00000526468 SOX4Q06945 474 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-204ENST00000526468 UPP1Q16831 310 aa12.86□□□□□ -0.35
CAPN1-204ENST00000526468 UVSSAQ2YD98 709 aa12.86□□□□□ -0.35
CAPN1-204ENST00000526468 VARS2Q5ST30 1063 aaKnown RBP12.86□□□□□ -0.35
CAPN1-204ENST00000526468 NT5DC1Q5TFE4 455 aa12.86□□□□□ -0.35
CAPN1-204ENST00000526468 RSPO2Q6UXX9 243 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-204ENST00000526468 RUBCNQ92622 972 aa12.86□□□□□ -0.35
CAPN1-204ENST00000526468 DDX23Q9BUQ8 820 aaKnown RBP12.86□□□□□ -0.35
CAPN1-204ENST00000526468 DDX19AQ9NUU7 478 aaKnown RBP12.86□□□□□ -0.35
CAPN1-204ENST00000526468 SLC38A7Q9NVC3 462 aa12.86□□□□□ -0.35
CAPN1-204ENST00000526468 NCDNQ9UBB6 729 aa12.86□□□□□ -0.35
CAPN1-204ENST00000526468 DNMT3BQ9UBC3 853 aaKnown RBP12.86□□□□□ -0.35
CAPN1-204ENST00000526468 KIAA1024Q9UPX6 916 aa12.86□□□□□ -0.35
CAPN1-204ENST00000526468 BACE2Q9Y5Z0 518 aa12.86□□□□□ -0.35
CAPN1-204ENST00000526468 WDR27A2RRH5 827 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 K7ERI5 159 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 SPTLC1O15269 473 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 CD72P21854 359 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 MUTP22033 750 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 IGFBP6P24592 240 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-204ENST00000526468 TARSP26639 723 aaKnown RBP12.85□□□□□ -0.35
CAPN1-204ENST00000526468 ELF1P32519 619 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 GRM5P41594 1212 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 MAGEA9P43362 315 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.358e-7■■□□□ 13.8
CAPN1-204ENST00000526468 PEX3P56589 373 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 ECM1Q16610 540 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 SLC44A4Q53GD3 710 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 DGLUCYQ7Z3D6 616 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 MCRS1Q96EZ8 462 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 CORO1BQ9BR76 489 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 MRPL4Q9BYD3 311 aaKnown RBP12.85□□□□□ -0.35
CAPN1-204ENST00000526468 FOXP1Q9H334 677 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-204ENST00000526468 ANKFY1Q9P2R3 1169 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 LRWD1Q9UFC0 647 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 TNFSF13BQ9Y275 285 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 MTF2Q9Y483 593 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-204ENST00000526468 NUB1Q9Y5A7 615 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 ANAPC1Q9H1A4 1944 aa12.85□□□□□ -0.35
CAPN1-204ENST00000526468 SMIM28A0A1B0GU29 152 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 FAM170BA6NMN3 283 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 HIP1RO75146 1068 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 ECI2O75521 394 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 CSTF1Q05048 431 aaKnown RBP12.84□□□□□ -0.35
CAPN1-204ENST00000526468 GRM2Q14416 872 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 CD300LGQ6UXG3 332 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 MAML2Q8IZL2 1156 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-204ENST00000526468 DCLK2Q8N568 766 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 FAM184AQ8NB25 1140 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 DRC1Q96MC2 740 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 RAB34Q9BZG1 259 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 CYP4F11Q9HBI6 524 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 HEBP1Q9NRV9 189 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 GDE1Q9NZC3 331 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 FBXO4Q9UKT5 387 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 SMG5Q9UPR3 1016 aaKnown RBP12.84□□□□□ -0.35
CAPN1-204ENST00000526468 INSL5Q9Y5Q6 135 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 NUP205Q92621 2012 aa12.84□□□□□ -0.35
CAPN1-204ENST00000526468 CHD8Q9HCK8 2581 aa12.83□□□□□ -0.35
CAPN1-204ENST00000526468 MED19A0JLT2 244 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms