RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 NELFCDQ8IXH7 590 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 C3orf58Q8NDZ4 430 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 CCDC47Q96A33 483 aaKnown RBP17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 SAAL1Q96ER3 474 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 CCDC34Q96HJ3 373 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 EMILIN2Q9BXX0 1053 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 ASB7Q9H672 318 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 TUBGCP4Q9UGJ1 667 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 UBQLN1Q9UMX0 589 aaKnown RBP17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 SF3B1O75533 1304 aaKnown RBP eCLIP17.63■□□□□ 0.419e-6■■■■■ 68.9
SSSCA1-202ENST00000526433 UBE4BO95155 1302 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 ANK1P16157 1881 aa17.63■□□□□ 0.41
SSSCA1-202ENST00000526433 TGFB1I1O43294 461 aa17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 XPOTO43592 962 aaKnown RBP17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 EXTL3O43909 919 aa17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 GADD45BO75293 160 aaPredicted RBP17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 CYP3A5P20815 502 aa17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 KLRC2P26717 231 aa17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 FAM160A1Q05DH4 1040 aa17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 CLUL1Q15846 466 aa17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 BMT2Q1RMZ1 405 aa17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 CEP57Q86XR8 500 aa17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 GPR65Q8IYL9 337 aa17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 TMEM130Q8N3G9 435 aa17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 SLC22A17Q8WUG5 538 aa17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 RIN2Q8WYP3 895 aaPredicted RBP17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 RXFP1Q9HBX9 757 aa17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 BARX2Q9UMQ3 279 aaPredicted RBP17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.62■□□□□ 0.41
SSSCA1-202ENST00000526433 KIAA0391O15091 583 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 TRAPPC3O43617 180 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 LRPAP1P30533 357 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 BRCC3P46736 316 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 SNRPFP62306 86 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 KNOP1Q1ED39 458 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 RTP2Q5QGT7 225 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 SPATA1Q5VX52 437 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 PPFIBP1Q86W92 1011 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 GPD1LQ8N335 351 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 KIAA0895Q8NCT3 520 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 NOC3LQ8WTT2 800 aaKnown RBP17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 MSLNLQ96KJ4 702 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 TTPALQ9BTX7 342 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 CD207Q9UJ71 328 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 DERAQ9Y315 318 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 HCFC2Q9Y5Z7 792 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 XIRP2A4UGR9 3374 aa17.61■□□□□ 0.41
SSSCA1-202ENST00000526433 GRXCR2A6NFK2 248 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 I3L4J1 428 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 TULP1O00294 542 aaPredicted RBP17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 CLIC2O15247 247 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 TEX28O15482 410 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 RHOBTB3O94955 611 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 IL18RAPO95256 599 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 NFICP08651 508 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 SRGAP2BP0DMP2 458 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 FGFR3P22607 806 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 GUCY2FP51841 1108 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 TMEM132DQ14C87 1099 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 PUS10Q3MIT2 529 aaKnown RBP17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 PTCRAQ6ISU1 281 aaPredicted RBP17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 ANKRD54Q6NXT1 300 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 PRSS55Q6UWB4 352 aaPredicted RBP17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 HS2ST1Q7LGA3 356 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 BRSK2Q8IWQ3 736 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 BEST2Q8NFU1 509 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 CASP10Q92851 521 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 TIGD1Q96MW7 591 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 AGPAT3Q9NRZ7 376 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 HSPBP1Q9NZL4 362 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 NUB1Q9Y5A7 615 aa17.6■□□□□ 0.41
SSSCA1-202ENST00000526433 VWA8A3KMH1 1905 aa17.59■□□□□ 0.41
SSSCA1-202ENST00000526433 ZNF233A6NK53 670 aa17.59■□□□□ 0.41
SSSCA1-202ENST00000526433 EPCAMP16422 314 aa17.59■□□□□ 0.41
SSSCA1-202ENST00000526433 PNOCQ13519 176 aa17.59■□□□□ 0.41
SSSCA1-202ENST00000526433 KCNB1Q14721 858 aa17.59■□□□□ 0.41
SSSCA1-202ENST00000526433 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.59■□□□□ 0.41
SSSCA1-202ENST00000526433 LNX1Q8TBB1 728 aaPredicted RBP17.59■□□□□ 0.41
SSSCA1-202ENST00000526433 PIK3R5Q8WYR1 880 aa17.59■□□□□ 0.41
SSSCA1-202ENST00000526433 RBAKQ9NYW8 714 aaPredicted RBP17.59■□□□□ 0.41
SSSCA1-202ENST00000526433 FNIP2Q9P278 1114 aa17.59■□□□□ 0.41
SSSCA1-202ENST00000526433 CGNQ9P2M7 1197 aaKnown RBP17.59■□□□□ 0.41
SSSCA1-202ENST00000526433 C2CD2Q9Y426 696 aa17.59■□□□□ 0.41
SSSCA1-202ENST00000526433 NCOR1O75376 2440 aa17.58■□□□□ 0.41
SSSCA1-202ENST00000526433 MBTPS2O43462 519 aa17.58■□□□□ 0.4
SSSCA1-202ENST00000526433 ADH1AP07327 375 aa17.58■□□□□ 0.4
SSSCA1-202ENST00000526433 RPL17P18621 184 aaKnown RBP17.58■□□□□ 0.4
SSSCA1-202ENST00000526433 TKTP29401 623 aaKnown RBP17.58■□□□□ 0.4
SSSCA1-202ENST00000526433 CLCN4P51793 760 aa17.58■□□□□ 0.4
SSSCA1-202ENST00000526433 WNT7BP56706 349 aa17.58■□□□□ 0.4
SSSCA1-202ENST00000526433 SYCE2Q6PIF2 218 aa17.58■□□□□ 0.4
SSSCA1-202ENST00000526433 NT5DC4Q86YG4 428 aa17.58■□□□□ 0.4
SSSCA1-202ENST00000526433 EFCAB13Q8IY85 973 aa17.58■□□□□ 0.4
SSSCA1-202ENST00000526433 IPO9Q96P70 1041 aaKnown RBP17.58■□□□□ 0.4
SSSCA1-202ENST00000526433 KIAA1586Q9HCI6 787 aa17.58■□□□□ 0.4
SSSCA1-202ENST00000526433 DPP3Q9NY33 737 aa17.58■□□□□ 0.4
SSSCA1-202ENST00000526433 IL9P15248 144 aa17.57■□□□□ 0.4
SSSCA1-202ENST00000526433 HOXB8P17481 243 aaPredicted RBP17.57■□□□□ 0.4
SSSCA1-202ENST00000526433 MCM4P33991 863 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms