RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 TARS2Q9BW92 718 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 LDAHQ9H6V9 325 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 FBXO34Q9NWN3 711 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 MOCS1Q9NZB8 636 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 HSFX1Q9UBD0 423 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 ZNF804BA4D1E1 1349 aa3.96□□□□□ -1.77
ECHDC1-219ENST00000526299 AOX1Q06278 1338 aa3.96□□□□□ -1.77
ECHDC1-219ENST00000526299 TRGV11A0A075B6L2 103 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 YY2O15391 372 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 BMP15O95972 392 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 IGKV2-30P06310 120 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 IL2RBP14784 551 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 ECHS1P30084 290 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 SREBF1P36956 1147 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 SSBP2P81877 361 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 EIF2B5Q13144 721 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 ATP13A4Q4VNC1 1196 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 KAZNQ674X7 775 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 ZNF529Q6P280 563 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 UBE3BQ7Z3V4 1068 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 NIM1KQ8IY84 436 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 PPM1KQ8N3J5 372 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 VGLL2Q8N8G2 317 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 TFAP2BQ92481 460 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 FEZ1Q99689 392 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 MYOCQ99972 504 aa3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 SENP6Q9GZR1 1112 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 TOPORSQ9NS56 1045 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-219ENST00000526299 GRIA3P42263 894 aa3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 FSCN1Q16658 493 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 TKFCQ3LXA3 575 aa3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 ZNF626Q68DY1 528 aa3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 FCRLBQ6BAA4 426 aa3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 HOMER1Q86YM7 354 aa3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 LEO1Q8WVC0 666 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 FATE1Q969F0 183 aa3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 RAX2Q96IS3 184 aa3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 ZNF48Q96MX3 618 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 FCRL4Q96PJ5 515 aa3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 GSTO2Q9H4Y5 243 aa3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 FAM30AQ9NZY2 134 aa3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 ADAM21Q9UKJ8 722 aa3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 WNT6Q9Y6F9 365 aa3.95□□□□□ -1.78
ECHDC1-219ENST00000526299 ORC4O43929 436 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 PRR35P0CG20 571 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 PTGER1P34995 402 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 ALDH1A3P47895 512 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 NOMO3P69849 1222 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 KLF9Q13886 244 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 NOMO1Q15155 1222 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 ETFDHQ16134 617 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 NOMO2Q5JPE7 1267 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 OTUD7BQ6GQQ9 843 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 VWA1Q6PCB0 445 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 CRELD2Q6UXH1 353 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 C16orf86Q6ZW13 317 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 FITM2Q8N6M3 262 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 Q8NA96 180 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 FBXL20Q96IG2 436 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 RNPC3Q96LT9 517 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 PNKPQ96T60 521 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 FLRT1Q9NZU1 646 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 SLC23A1Q9UHI7 598 aa3.94□□□□□ -1.78
ECHDC1-219ENST00000526299 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 CCDC151A5D8V7 595 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 GSG1L2A8MUP6 293 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 MPPED1O15442 326 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 ONECUT2O95948 504 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 GSPT1P15170 499 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 FPR1P21462 350 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 FHL1Q13642 323 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 LLGL1Q15334 1064 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 KLHL22Q53GT1 634 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 ZNF782Q6ZMW2 699 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 TSHZ1Q6ZSZ6 1077 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 ACAP3Q96P50 834 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 LANCL2Q9NS86 450 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 RBM12Q9NTZ6 932 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 TMEM140Q9NV12 185 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 FANCLQ9NW38 375 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 AJAP1Q9UKB5 411 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 ACTL7AQ9Y615 435 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 ZNF521Q96K83 1311 aa3.93□□□□□ -1.78
ECHDC1-219ENST00000526299 TCRBV7S2A1N4TA0A589 114 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 GOLGA8AA7E2F4 631 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 SRGNP10124 158 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 ENPP1P22413 925 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 GUCY1A2P33402 732 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 TFF2Q03403 129 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 GRM1Q13255 1194 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 ADRM1Q16186 407 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 CCDC144BQ3MJ40 725 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 MUM1L1Q5H9M0 696 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 TBC1D15Q8TC07 691 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 TSPEARQ8WU66 669 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 TGFBRAP1Q8WUH2 860 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 NUP133Q8WUM0 1156 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 AUTS2Q8WXX7 1259 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms