RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SLC4A7Q9Y6M7 1214 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 CHD9Q3L8U1 2897 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 CDH23Q9H251 3354 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 LINC01553A4QN01 128 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 CASTOR2A6NHX0 329 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 RFXAPO00287 272 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 PSMA7O14818 248 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 HOXA2O43364 376 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 CALUO43852 315 aaPredicted RBP7.04□□□□□ -1.28
CD44-214ENST00000525211 EXOC3O60645 756 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 EOMESO95936 686 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 CST3P01034 146 aaPredicted RBP7.04□□□□□ -1.28
CD44-214ENST00000525211 AMHP03971 560 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 ACTN1P12814 892 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 KCNE1P15382 129 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 ZNF18P17022 549 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 PTMSP20962 102 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 SLC11A1P49279 550 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 USP46P62068 366 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 DSC1Q08554 894 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 PSMD6Q15008 389 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 PCBP1Q15365 356 aaKnown RBP eCLIP7.04□□□□□ -1.28
CD44-214ENST00000525211 SNRNP35Q16560 246 aaKnown RBP7.04□□□□□ -1.28
CD44-214ENST00000525211 EDRF1Q3B7T1 1238 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 CDKAL1Q5VV42 579 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 SPATA1Q5VX52 437 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 SLFN12LQ6IEE8 588 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 DPY19L2P1Q6NXN4 242 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 LRSAM1Q6UWE0 723 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 TAS1R1Q7RTX1 841 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 COLGALT2Q8IYK4 626 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 FAM186BQ8IYM0 893 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 TDHQ8IZJ6 230 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 CSGALNACT2Q8N6G5 542 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 C1orf127Q8N9H9 656 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 RNF214Q8ND24 703 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 SLC17A8Q8NDX2 589 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 ENOX1Q8TC92 643 aaKnown RBP7.04□□□□□ -1.28
CD44-214ENST00000525211 PARD3BQ8TEW8 1205 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 HASPINQ8TF76 798 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 TMEM174Q8WUU8 243 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 SEMA4DQ92854 862 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 HLA-CQ95604 372 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 CCDC127Q96BQ5 260 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 CCDC34Q96HJ3 373 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 ZFRQ96KR1 1074 aaKnown RBP7.04□□□□□ -1.28
CD44-214ENST00000525211 ADPGKQ9BRR6 497 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 C17orf80Q9BSJ5 609 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 CCDC94Q9BW85 323 aaPredicted RBP7.04□□□□□ -1.28
CD44-214ENST00000525211 PBX4Q9BYU1 374 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 TRIM6Q9C030 488 aaPredicted RBP7.04□□□□□ -1.28
CD44-214ENST00000525211 MMRN2Q9H8L6 949 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 RPF1Q9H9Y2 349 aaKnown RBP7.04□□□□□ -1.28
CD44-214ENST00000525211 MARCH5Q9NX47 278 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 RBAKQ9NYW8 714 aaPredicted RBP7.04□□□□□ -1.28
CD44-214ENST00000525211 GIT1Q9Y2X7 761 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 NFE2L3Q9Y4A8 694 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 PCDHGC5Q9Y5F6 944 aa7.04□□□□□ -1.28
CD44-214ENST00000525211 ZNF233A6NK53 670 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 I3L4J1 428 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 HRO43593 1189 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 HCRTO43612 131 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 LILRB3O75022 631 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 RNF40O75150 1001 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 C4BPAP04003 597 aaKnown RBP7.03□□□□□ -1.28
CD44-214ENST00000525211 CA3P07451 260 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 GALTP07902 379 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 CCDC192P0DO97 292 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 DLATP10515 647 aaKnown RBP7.03□□□□□ -1.28
CD44-214ENST00000525211 DNAJB1P25685 340 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 ERCC5P28715 1186 aaPredicted RBP7.03□□□□□ -1.28
CD44-214ENST00000525211 BRCC3P46736 316 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 KCNJ6P48051 423 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 GCLMP48507 274 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 KLK7P49862 253 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 ZNF165P49910 485 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 RAB27AP51159 221 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 CDR1P51861 262 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 BCAR1P56945 870 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 MCCD1P59942 119 aaPredicted RBP7.03□□□□□ -1.28
CD44-214ENST00000525211 FKBP3Q00688 224 aaKnown RBP7.03□□□□□ -1.28
CD44-214ENST00000525211 GUCA2AQ02747 115 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 TAP1Q03518 808 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 LRRC63Q05C16 580 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 NCBP1Q09161 790 aaKnown RBP7.03□□□□□ -1.28
CD44-214ENST00000525211 CBWD6Q4V339 395 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 CBWD3Q5JTY5 395 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 MIIPQ5JXC2 388 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 CBWD5Q5RIA9 395 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 TDRD10Q5VZ19 366 aaKnown RBP7.03□□□□□ -1.28
CD44-214ENST00000525211 SPOPLQ6IQ16 392 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 STXBP4Q6ZWJ1 553 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 HS2ST1Q7LGA3 356 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 FILIP1Q7Z7B0 1213 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 TRIM59Q8IWR1 403 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 SYAP1Q96A49 352 aaPredicted RBP7.03□□□□□ -1.28
CD44-214ENST00000525211 B3GALT6Q96L58 329 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 CNOT6LQ96LI5 555 aaKnown RBP7.03□□□□□ -1.28
CD44-214ENST00000525211 YME1L1Q96TA2 773 aa7.03□□□□□ -1.28
CD44-214ENST00000525211 PI4K2AQ9BTU6 479 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms