RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 GPR149Q86SP6 731 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 GPR65Q8IYL9 337 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 IQUBQ8NA54 791 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 HPS3Q969F9 1004 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 NECTIN4Q96NY8 510 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 STRA6Q9BX79 667 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 C1QTNF1Q9BXJ1 281 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 PLEKHA5Q9HAU0 1116 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 FAM13BQ9NYF5 915 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 CPSF3Q9UKF6 684 aaKnown RBP13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 RCOR1Q9UKL0 485 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 NUB1Q9Y5A7 615 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 C5orf42Q9H799 3197 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 NCOR1O75376 2440 aa13.99□□□□□ -0.17
TRAPPC4-205ENST00000525079 FRMD3A2A2Y4 597 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 TRAPPC3O43617 180 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 PRPF6O94906 941 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 ALADP13716 330 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 CASP1P29466 404 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 RPL9P32969 192 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 ABCD1P33897 745 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 OR1D2P34982 312 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 CREMQ03060 361 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 KYAT1Q16773 422 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 L1TD1Q5T7N2 865 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 RESP18Q5W5W9 173 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 SLFN12LQ6IEE8 588 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 RSPO2Q6UXX9 243 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 CCDC65Q8IXS2 484 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 KREMEN2Q8NCW0 462 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 GLIS3Q8NEA6 775 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 POMGNT1Q8WZA1 660 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 HVCN1Q96D96 273 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 ACCSQ96QU6 501 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 TNMDQ9H2S6 317 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 C11orf16Q9NQ32 467 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 KBTBD4Q9NVX7 518 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 AGO2Q9UKV8 859 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 PCDHB13Q9Y5F0 798 aa13.98□□□□□ -0.17
TRAPPC4-205ENST00000525079 C2CD4DB7Z1M9 353 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 ADSSP30520 456 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 MCM4P33991 863 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 AFMP43652 599 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 ASIC1P78348 528 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 ZBTB6Q15916 424 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 TMEM31Q5JXX7 168 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 JADE1Q6IE81 842 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 PDXDC1Q6P996 788 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 SYCP3Q8IZU3 236 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 ZSWIM2Q8NEG5 633 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 LEO1Q8WVC0 666 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 LRFN3Q9BTN0 628 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 TRIM9Q9C026 710 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 LRRC27Q9C0I9 530 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 BLZF1Q9H2G9 400 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 CUEDC2Q9H467 287 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 OLFML3Q9NRN5 406 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 MTRRQ9UBK8 725 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 DPP7Q9UHL4 492 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 UBQLN1Q9UMX0 589 aaKnown RBP13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 EXOC7Q9UPT5 735 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 NR2E1Q9Y466 385 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 CDY1Q9Y6F8 540 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 STYXL1Q9Y6J8 313 aa13.97□□□□□ -0.17
TRAPPC4-205ENST00000525079 C2orf16Q68DN1 1984 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 MTCL1Q9Y4B5 1905 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 PPEF2O14830 753 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 ADRB2P07550 413 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 NFICP08651 508 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 ARPP19P56211 112 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 AMPD3Q01432 767 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 VARS2Q5ST30 1063 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 ELMSAN1Q6PJG2 1045 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 CRELD2Q6UXH1 353 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 GRAMD1CQ8IYS0 662 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 CMASQ8NFW8 434 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 NOC3LQ8WTT2 800 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 HDAC7Q8WUI4 952 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 SMG7Q92540 1137 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 ZNF707Q96C28 371 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 SAAL1Q96ER3 474 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 SPATA32Q96LK8 384 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 PLEKHA4Q9H4M7 779 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 PCIF1Q9H4Z3 704 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 PIDD1Q9HB75 910 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 SERTAD1Q9UHV2 236 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 RAPGEFL1Q9UHV5 662 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 KCNH3Q9ULD8 1083 aa13.96□□□□□ -0.17
TRAPPC4-205ENST00000525079 GOLGA8IPA6NC78 632 aa13.95□□□□□ -0.18
TRAPPC4-205ENST00000525079 GOLGA8JA6NMD2 632 aa13.95□□□□□ -0.18
TRAPPC4-205ENST00000525079 GPR37L1O60883 481 aa13.95□□□□□ -0.18
TRAPPC4-205ENST00000525079 ZMYND10O75800 440 aa13.95□□□□□ -0.18
TRAPPC4-205ENST00000525079 CYP3A5P20815 502 aa13.95□□□□□ -0.18
TRAPPC4-205ENST00000525079 LRPAP1P30533 357 aa13.95□□□□□ -0.18
TRAPPC4-205ENST00000525079 KRT85P78386 507 aa13.95□□□□□ -0.18
TRAPPC4-205ENST00000525079 RAB33AQ14088 237 aa13.95□□□□□ -0.18
TRAPPC4-205ENST00000525079 BECN1Q14457 450 aa13.95□□□□□ -0.18
TRAPPC4-205ENST00000525079 POSTNQ15063 836 aa13.95□□□□□ -0.18
TRAPPC4-205ENST00000525079 C15orf39Q6ZRI6 1047 aa13.95□□□□□ -0.18
TRAPPC4-205ENST00000525079 ANKS3Q6ZW76 656 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms