RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PLEKHA5Q9HAU0 1116 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 TFIP11Q9UBB9 837 aaKnown RBP20.23■□□□□ 0.83
CAPN1-203ENST00000525013 MTRRQ9UBK8 725 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 FBXW11Q9UKB1 542 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 CDY1Q9Y6F8 540 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 CLUHO75153 1309 aa20.23■□□□□ 0.83
CAPN1-203ENST00000525013 OGTO15294 1046 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 TNFSF9P41273 254 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 STAT6P42226 847 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 GTF2BQ00403 316 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 PPP2R3AQ06190 1150 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 KYAT1Q16773 422 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 PPM1LQ5SGD2 360 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 ANKS3Q6ZW76 656 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 BMP8AQ7Z5Y6 402 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 SFR1Q86XK3 245 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 UBALD2Q8IYN6 164 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 DDX12PQ92771 950 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 KIF12Q96FN5 646 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 RPF1Q9H9Y2 349 aaKnown RBP20.22■□□□□ 0.83
CAPN1-203ENST00000525013 TUBGCP4Q9UGJ1 667 aa20.22■□□□□ 0.83
CAPN1-203ENST00000525013 TTC26A0AVF1 554 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 MYMKA6NI61 221 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 LACTBL1A8MY62 500 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 PIGRP01833 764 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 C8AP07357 584 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 MCM4P33991 863 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 NASPP49321 788 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-203ENST00000525013 RAB33AQ14088 237 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 ZBTB41Q5SVQ8 909 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 AXDND1Q5T1B0 1012 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-203ENST00000525013 RSPO2Q6UXX9 243 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-203ENST00000525013 MAP4K3Q8IVH8 894 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 SUGP1Q8IWZ8 645 aaKnown RBP20.21■□□□□ 0.83
CAPN1-203ENST00000525013 FAM212AQ96EL1 285 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 FIZ1Q96SL8 496 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 SMOC2Q9H3U7 446 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 POLIQ9UNA4 740 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 ARIH1Q9Y4X5 557 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-203ENST00000525013 BACE2Q9Y5Z0 518 aa20.21■□□□□ 0.83
CAPN1-203ENST00000525013 MORC2Q9Y6X9 1032 aaPredicted RBP20.21■□□□□ 0.83
CAPN1-203ENST00000525013 A0A0B4J269 797 aa20.2■□□□□ 0.82
CAPN1-203ENST00000525013 SPTLC2O15270 562 aa20.2■□□□□ 0.82
CAPN1-203ENST00000525013 N4BP1O75113 896 aaKnown RBP20.2■□□□□ 0.82
CAPN1-203ENST00000525013 PLA2G5P39877 138 aa20.2■□□□□ 0.82
CAPN1-203ENST00000525013 ENOX2Q16206 610 aaKnown RBP20.2■□□□□ 0.82
CAPN1-203ENST00000525013 FOXD4L6Q3SYB3 417 aaPredicted RBP20.2■□□□□ 0.82
CAPN1-203ENST00000525013 VARS2Q5ST30 1063 aaKnown RBP20.2■□□□□ 0.82
CAPN1-203ENST00000525013 SLC39A4Q6P5W5 647 aa20.2■□□□□ 0.82
CAPN1-203ENST00000525013 FOXD4L3Q6VB84 417 aaPredicted RBP20.2■□□□□ 0.82
CAPN1-203ENST00000525013 PDILTQ8N807 584 aa20.2■□□□□ 0.82
CAPN1-203ENST00000525013 SPRYD3Q8NCJ5 442 aa20.2■□□□□ 0.82
CAPN1-203ENST00000525013 LINC00301Q8NCQ3 95 aa20.2■□□□□ 0.82
CAPN1-203ENST00000525013 SLC7A14Q8TBB6 771 aa20.2■□□□□ 0.82
CAPN1-203ENST00000525013 MRPL44Q9H9J2 332 aaKnown RBP20.2■□□□□ 0.82
CAPN1-203ENST00000525013 TBC1D7Q9P0N9 293 aa20.2■□□□□ 0.82
CAPN1-203ENST00000525013 A0A087X0B3 334 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 ANKRD63C9JTQ0 380 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 SYN3O14994 580 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 CCL16O15467 120 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 HNRNPA1P09651 372 aaKnown RBP eCLIP20.19■□□□□ 0.82
CAPN1-203ENST00000525013 IDEP14735 1019 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 GAP43P17677 238 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 ARPP19P56211 112 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 GET4Q7L5D6 327 aaPredicted RBP20.19■□□□□ 0.82
CAPN1-203ENST00000525013 ZNF720Q7Z2F6 126 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 TMEM130Q8N3G9 435 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 FBXL6Q8N531 539 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 ASIC4Q96FT7 647 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 MYADMQ96S97 322 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 ST6GALNAC4Q9H4F1 302 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 SEL1LQ9UBV2 794 aa20.19■□□□□ 0.82
CAPN1-203ENST00000525013 UBQLN1Q9UMX0 589 aaKnown RBP20.19■□□□□ 0.82
CAPN1-203ENST00000525013 TISP43B9A030 160 aa20.18■□□□□ 0.82
CAPN1-203ENST00000525013 H7C4K7 107 aa20.18■□□□□ 0.82
CAPN1-203ENST00000525013 XPOTO43592 962 aaKnown RBP20.18■□□□□ 0.82
CAPN1-203ENST00000525013 FAM189A1O60320 539 aa20.18■□□□□ 0.82
CAPN1-203ENST00000525013 XYLBO75191 536 aa20.18■□□□□ 0.82
CAPN1-203ENST00000525013 PAPLNO95428 1278 aa20.18■□□□□ 0.82
CAPN1-203ENST00000525013 ADALQ6DHV7 355 aa20.18■□□□□ 0.82
CAPN1-203ENST00000525013 SLFN12LQ6IEE8 588 aa20.18■□□□□ 0.82
CAPN1-203ENST00000525013 GRASPQ7Z6J2 395 aaPredicted RBP20.18■□□□□ 0.82
CAPN1-203ENST00000525013 DNAJC19Q96DA6 116 aa20.18■□□□□ 0.82
CAPN1-203ENST00000525013 SUSD3Q96L08 255 aa20.18■□□□□ 0.82
CAPN1-203ENST00000525013 KCNK12Q9HB15 430 aa20.18■□□□□ 0.82
CAPN1-203ENST00000525013 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.18■□□□□ 0.82
CAPN1-203ENST00000525013 ANK1P16157 1881 aa20.18■□□□□ 0.82
CAPN1-203ENST00000525013 WDFY4Q6ZS81 3184 aa20.17■□□□□ 0.82
CAPN1-203ENST00000525013 ZSCAN22P10073 491 aaPredicted RBP20.17■□□□□ 0.82
CAPN1-203ENST00000525013 PDIA4P13667 645 aaKnown RBP20.17■□□□□ 0.82
CAPN1-203ENST00000525013 FSHRP23945 695 aa20.17■□□□□ 0.82
CAPN1-203ENST00000525013 ACOT2P49753 483 aa20.17■□□□□ 0.82
CAPN1-203ENST00000525013 GUCY2FP51841 1108 aa20.17■□□□□ 0.82
CAPN1-203ENST00000525013 TDGQ13569 410 aa20.17■□□□□ 0.82
CAPN1-203ENST00000525013 ZBTB6Q15916 424 aa20.17■□□□□ 0.82
CAPN1-203ENST00000525013 UVSSAQ2YD98 709 aa20.17■□□□□ 0.82
CAPN1-203ENST00000525013 CTXN3Q4LDR2 81 aa20.17■□□□□ 0.82
CAPN1-203ENST00000525013 APPL2Q8NEU8 664 aa20.17■□□□□ 0.82
CAPN1-203ENST00000525013 HVCN1Q96D96 273 aa20.17■□□□□ 0.82
CAPN1-203ENST00000525013 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms