RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CCNE1P24864 410 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 TKTP29401 623 aaKnown RBP4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 POLR2BP30876 1174 aaKnown RBP4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 ABCD1P33897 745 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 GCLMP48507 274 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 ARPP19P56211 112 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 MYL6P60660 151 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 KRT17Q04695 432 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 TYRO3Q06418 890 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 PPP3CAQ08209 521 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 BFSP1Q12934 665 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 PAK1Q13153 545 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 BIRC3Q13489 604 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 STIM1Q13586 685 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 PSMD6Q15008 389 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 ZBTB6Q15916 424 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 UPP1Q16831 310 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 CCDC142Q17RM4 750 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 CCDC40Q4G0X9 1142 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 TIGD5Q53EQ6 642 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 TCEAL5Q5H9L2 206 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 RTP2Q5QGT7 225 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 C1orf220Q5T0J3 134 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 FAM171A1Q5VUB5 890 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 TCERG1LQ5VWI1 586 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 SPATA1Q5VX52 437 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 C9orf57Q5W0N0 161 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 SPOPLQ6IQ16 392 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 TTI2Q6NXR4 508 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 FUT10Q6P4F1 479 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 SASS6Q6UVJ0 657 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 SPATA31D4Q6ZUB0 917 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 ELOA2Q8IYF1 753 aaPredicted RBP4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 FAM186BQ8IYM0 893 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 C1orf127Q8N9H9 656 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 BEST2Q8NFU1 509 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 RIN2Q8WYP3 895 aaPredicted RBP4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 KCNN1Q92952 543 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 FNBP1Q96RU3 617 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 GAS2L1Q99501 681 aaPredicted RBP4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 TSG101Q99816 390 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 TCF25Q9BQ70 676 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 LPIN3Q9BQK8 851 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 PI4K2AQ9BTU6 479 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 C11orf84Q9BUA3 381 aaPredicted RBP4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 COLEC11Q9BWP8 271 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 AAASQ9NRG9 546 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 INTS13Q9NVM9 706 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 RNF216Q9NWF9 866 aaPredicted RBP4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 SIX4Q9UIU6 781 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 ADAM28Q9UKQ2 775 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 UBQLN1Q9UMX0 589 aaKnown RBP4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 POLIQ9UNA4 740 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 FRMD4BQ9Y2L6 1034 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 NUB1Q9Y5A7 615 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 MTCH2Q9Y6C9 303 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 GBF1Q92538 1859 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 C5orf67F2Z3F1 127 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 CETN3O15182 167 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 KIF20AO95235 890 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 VNN1O95497 513 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 TNNC2P02585 160 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 RB1P06400 928 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 WEE2P0C1S8 567 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 OR4Q2P0C623 313 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 KRT13P13646 458 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 SCP2P22307 547 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 PSMC2P35998 433 aaKnown RBP4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 RAP1GAPP47736 663 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 NRIP1P48552 1158 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 VAMP7P51809 220 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 PLCB3Q01970 1234 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 APBA1Q02410 837 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 LRMPQ12912 555 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 ORC1Q13415 861 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 CLUL1Q15846 466 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 PTPN21Q16825 1174 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 TPD52L1Q16890 204 aaPredicted RBP4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 KLHL40Q2TBA0 621 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 ZSCAN23Q3MJ62 389 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 ANO6Q4KMQ2 910 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 TDRD10Q5VZ19 366 aaKnown RBP4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 KIAA1841Q6NSI8 718 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 DCLRE1AQ6PJP8 1040 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 RSPO2Q6UXX9 243 aaPredicted RBP4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 DSTYKQ6XUX3 929 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 SCARA5Q6ZMJ2 495 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 RBM43Q6ZSC3 357 aaKnown RBP4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 TRAPPC11Q7Z392 1133 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 DDX53Q86TM3 631 aaKnown RBP4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 PALB2Q86YC2 1186 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 GPIHBP1Q8IV16 184 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 C12orf56Q8IXR9 622 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 AOPEPQ8N6M6 819 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 TRIML1Q8N9V2 468 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 MLKLQ8NB16 471 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 VN1R2Q8NFZ6 395 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 CXorf38Q8TB03 319 aa4.97□□□□□ -1.61
CHMP4A-202ENST00000524955 GOLGA5Q8TBA6 731 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms