RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 PARD6AQ9NPB6 346 aa15.22■□□□□ 0.03
CSTF3-206ENST00000524827 NDRG2Q9UN36 371 aaKnown RBP15.22■□□□□ 0.03
CSTF3-206ENST00000524827 COL4A2P08572 1712 aa15.22■□□□□ 0.03
CSTF3-206ENST00000524827 WDR27A2RRH5 827 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 ARHGEF35A5YM69 484 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 PRRG1O14668 218 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 KRT37O76014 449 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 ABLIM3O94929 683 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 TDGF1P13385 188 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 ELF1P32519 619 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 SOX4Q06945 474 aaPredicted RBP15.21■□□□□ 0.03
CSTF3-206ENST00000524827 FAM78AQ5JUQ0 283 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 ATF7IP2Q5U623 682 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 CHRDQ9H2X0 955 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 BRD9Q9H8M2 597 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 ZFP14Q9HCL3 533 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 GMEB2Q9UKD1 530 aa15.21■□□□□ 0.03
CSTF3-206ENST00000524827 MAP1BP46821 2468 aaKnown RBP15.21■□□□□ 0.02
CSTF3-206ENST00000524827 CHD8Q9HCK8 2581 aa15.21■□□□□ 0.02
CSTF3-206ENST00000524827 SMIM28A0A1B0GU29 152 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 MAN2B1O00754 1011 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 NRG2O14511 850 aaPredicted RBP15.2■□□□□ 0.02
CSTF3-206ENST00000524827 LARGE1O95461 756 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 MCM7P33993 719 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 CCR2P41597 374 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 EFNA5P52803 228 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 ARPP19P56211 112 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 CEP120Q8N960 986 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 NSUN7Q8NE18 718 aaKnown RBP15.2■□□□□ 0.02
CSTF3-206ENST00000524827 GTF3C6Q969F1 213 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 ASB16Q96NS5 453 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 RTKNQ9BST9 563 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 CYP4F11Q9HBI6 524 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 POLD4Q9HCU8 107 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 INSL5Q9Y5Q6 135 aa15.2■□□□□ 0.02
CSTF3-206ENST00000524827 TICRRQ7Z2Z1 1910 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 DCDC2BA2VCK2 349 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 ZNF197O14709 1029 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 SEC24AO95486 1093 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 ATF2P15336 505 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 RPA1P27694 616 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 GRM5P41594 1212 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 ANKRD1Q15327 319 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 LPAL2Q16609 132 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 PDZD4Q76G19 769 aaPredicted RBP15.19■□□□□ 0.02
CSTF3-206ENST00000524827 APBB1IPQ7Z5R6 666 aaPredicted RBP15.19■□□□□ 0.02
CSTF3-206ENST00000524827 TCEAL8Q8IYN2 117 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 ERMNQ8TAM6 284 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 IRF7Q92985 503 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 IFT74Q96LB3 600 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 IER2Q9BTL4 223 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 TRMT61BQ9BVS5 477 aaKnown RBP15.19■□□□□ 0.02
CSTF3-206ENST00000524827 DAXXQ9UER7 740 aaPredicted RBP15.19■□□□□ 0.02
CSTF3-206ENST00000524827 RAB23Q9ULC3 237 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 TNFSF13BQ9Y275 285 aa15.19■□□□□ 0.02
CSTF3-206ENST00000524827 PODXLO00592 558 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 JAK2O60674 1132 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 MICAL2O94851 1124 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 YARSP54577 528 aaKnown RBP15.18■□□□□ 0.02
CSTF3-206ENST00000524827 NRLP54845 237 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 SPEM2Q0P670 501 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 TRIM29Q14134 588 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 ME3Q16798 604 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 XKR4Q5GH76 650 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 VITQ6UXI7 678 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 ALKAL1Q6UXT8 129 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 MAMSTRQ6ZN01 415 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 MAP4K3Q8IVH8 894 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 FAM3CQ92520 227 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 KIFAP3Q92845 792 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 SMARCD2Q92925 531 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 ZSWIM3Q96MP5 696 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 ZMAT2Q96NC0 199 aaKnown RBP15.18■□□□□ 0.02
CSTF3-206ENST00000524827 CCDC94Q9BW85 323 aaPredicted RBP15.18■□□□□ 0.02
CSTF3-206ENST00000524827 CDT1Q9H211 546 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 ZNF334Q9HCZ1 680 aaPredicted RBP15.18■□□□□ 0.02
CSTF3-206ENST00000524827 TOPORSQ9NS56 1045 aaPredicted RBP15.18■□□□□ 0.02
CSTF3-206ENST00000524827 SLC38A7Q9NVC3 462 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 FBXL5Q9UKA1 691 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 PIAS3Q9Y6X2 628 aa15.18■□□□□ 0.02
CSTF3-206ENST00000524827 H7C4K7 107 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 SYN3O14994 580 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 OR52Z1P0C646 297 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 PSMC3P17980 439 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 GDI1P31150 447 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 CCR3P51677 355 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 OSTNP61366 133 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 PPP2R5DQ14738 602 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 ZNF568Q3ZCX4 644 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 CYP4A22Q5TCH4 519 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 TPGS2Q68CL5 300 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 LAIR1Q6GTX8 287 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 HS6ST3Q8IZP7 471 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 BHMT2Q9H2M3 363 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 LMAN1LQ9HAT1 526 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 TRPV5Q9NQA5 729 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.17■□□□□ 0.02
CSTF3-206ENST00000524827 NCANO14594 1321 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 PHLPP2Q6ZVD8 1323 aa15.17■□□□□ 0.02
CSTF3-206ENST00000524827 CITO14578 2027 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms