RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	GUCY1A3	Q02108	690 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	STRN3	Q13033	797 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	MAPRE1	Q15691	268 aa	Known RBP	5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	GFOD2	Q3B7J2	385 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	IQSEC1	Q6DN90	963 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	IL31	Q6EBC2	164 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	GDF7	Q7Z4P5	450 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	ZNF384	Q8TF68	577 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	DLG3	Q92796	817 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	CAMKK2	Q96RR4	588 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	NDC1	Q9BTX1	674 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	OBP2A	Q9NY56	170 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	TRHDE	Q9UKU6	1024 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	DAAM1	Q9Y4D1	1078 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	SCIN	Q9Y6U3	715 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	MROH2A	A6NES4	1674 aa		5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	ZNF142	P52746	1687 aa	Predicted RBP	5.28	□□□□□ -1.56
PCM1-223	ENST00000524356	LRP6	O75581	1613 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	UNC119B	A6NIH7	251 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	GABRD	O14764	452 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	RFPL1	O75677	317 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	ESRRB	O95718	433 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	TRIM27	P14373	513 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	KCNA6	P17658	529 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	SERPINB3	P29508	390 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	MPL	P40238	635 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	RGS3	P49796	1198 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	FNDC3B	Q53EP0	1204 aa	Known RBP	5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	PASD1	Q8IV76	773 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	PAF1	Q8N7H5	531 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	SLC7A14	Q8TBB6	771 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	WDR66	Q8TBY9	1149 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	COG1	Q8WTW3	980 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	LEO1	Q8WVC0	666 aa	Predicted RBP	5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	WDR92	Q96MX6	357 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	PAGR1	Q9BTK6	254 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	HAPLN2	Q9GZV7	340 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	ANAPC4	Q9UJX5	808 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	SYCP2	Q9BX26	1530 aa		5.27	□□□□□ -1.57
PCM1-223	ENST00000524356	MBD5	Q9P267	1494 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	SALL3	Q9BXA9	1300 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	LRRIQ1	Q96JM4	1722 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	PLXNC1	O60486	1568 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	IQCA1L	A6NCM1	817 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	GOLGA6C	A6NDK9	693 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	GOLGA6B	A6NDN3	693 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	LRRC3C	A6NJW4	275 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	KCNAB3	O43448	404 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	TCEA3	O75764	348 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	GOLGA6D	P0CG33	693 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	BMPR1A	P36894	532 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	KIR2DL3	P43628	341 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	TRAPPC10	P48553	1259 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	STAT4	Q14765	748 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	TMEM132B	Q14DG7	1078 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	FAM47C	Q5HY64	1035 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	METTL24	Q5JXM2	366 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	LRRC47	Q8N1G4	583 aa	Known RBP	5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	SH2D3C	Q8N5H7	860 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	JPH3	Q8WXH2	748 aa	Predicted RBP	5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	ASB10	Q8WXI3	467 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	RUNDC1	Q96C34	613 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	TEX101	Q9BY14	249 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	C14orf93	Q9H972	538 aa	Known RBP	5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	AS3MT	Q9HBK9	375 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	GOLGA6A	Q9NYA3	693 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	USP25	Q9UHP3	1055 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	DNAI1	Q9UI46	699 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	NCOA2	Q15596	1464 aa		5.26	□□□□□ -1.57
PCM1-223	ENST00000524356	TNKS	O95271	1327 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	UGGT1	Q9NYU2	1555 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	XIRP1	Q702N8	1843 aa	Known RBP	5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	ITSN2	Q9NZM3	1697 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	CLIP1	P30622	1438 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	FMN1	Q68DA7	1419 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	KIAA1107	Q9UPP5	1409 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	ATP7A	Q04656	1500 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	CCDC163	A0A0D9SF12	145 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	GAGE12B	A1L429	117 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	GAGE12H	A6NDE8	117 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	LEFTY2	O00292	366 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	GSTA4	O15217	222 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	HOXA3	O43365	443 aa	Predicted RBP	5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	DNAJC8	O75937	253 aa	Predicted RBP	5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	PRL	P01236	227 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	SRGN	P10124	158 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	CPE	P16870	476 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	ZSCAN20	P17040	1043 aa	Predicted RBP	5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	MAN1A1	P33908	653 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	HTR3A	P46098	478 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	GUCY1B3	Q02153	619 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	TP53BP2	Q13625	1128 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	SIM2	Q14190	667 aa	Predicted RBP	5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	SEPT7	Q16181	437 aa	Known RBP	5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	FAM209A	Q5JX71	171 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	RNF219	Q5W0B1	726 aa	Predicted RBP	5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	DDX46	Q7L014	1031 aa	Known RBP	5.25	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms