RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	RNF43	Q68DV7	783 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	VIT	Q6UXI7	678 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057		Q6ZS52	159 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	RTL10	Q7L3V2	364 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	NEK8	Q86SG6	692 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	KBTBD6	Q86V97	674 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	WDR5B	Q86VZ2	330 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	POTED	Q86YR6	584 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	RDM1	Q8NG50	284 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	ZSWIM3	Q96MP5	696 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	SCNM1	Q9BWG6	230 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	CSRNP2	Q9H175	543 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	KLK14	Q9P0G3	267 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	RBM19	Q9Y4C8	960 aa	Known RBP	11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	LAMA1	P25391	3075 aa		11.94	□□□□□ -0.5
SORBS3-222	ENST00000524057	LAMA5	O15230	3695 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	CCDC194	A0A1B0GVG4	234 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	AXL	P30530	894 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	MLLT6	P55198	1093 aa	Predicted RBP	11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	ZNF252P-AS1	Q0IIN9	211 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	GRIK3	Q13003	919 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	NBR1	Q14596	966 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	PRSS36	Q5K4E3	855 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	NOTUM	Q6P988	496 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	CACNA2D4	Q7Z3S7	1137 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	C4orf32	Q8N8J7	132 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	RNF149	Q8NC42	400 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	GAB3	Q8WWW8	586 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	TCEAL4	Q96EI5	215 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	C8orf76	Q96K31	380 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	ASB16	Q96NS5	453 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	MTMR9	Q96QG7	549 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	NXF3	Q9H4D5	531 aa	Known RBP	11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	DDX25	Q9UHL0	483 aa	Known RBP	11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	GREB1	Q4ZG55	1949 aa		11.93	□□□□□ -0.5
SORBS3-222	ENST00000524057	SMG1	Q96Q15	3661 aa	Known RBP	11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	C4orf47	A7E2U8	309 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	ARNTL	O00327	626 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	ZNF263	O14978	683 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	ASAP2	O43150	1006 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	ERLIN2	O94905	339 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	KIF4A	O95239	1232 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	U2AF2	P26368	475 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	GJB2	P29033	226 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	VIPR2	P41587	438 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	HMGN5	P82970	282 aa	Known RBP	11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	LRRC32	Q14392	662 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	SH3PXD2A	Q5TCZ1	1133 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	TCEAL6	Q6IPX3	200 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	PSPC1	Q8WXF1	523 aa	Known RBP	11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	SLC7A3	Q8WY07	619 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	TCEAL3	Q969E4	200 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	CCDC51	Q96ER9	411 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	DHX33	Q9H6R0	707 aa	Known RBP	11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	VPS45	Q9NRW7	570 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	PCDHGA5	Q9Y5G8	931 aa		11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	TDRD15	B5MCY1	1934 aa	Known RBP	11.92	□□□□□ -0.5
SORBS3-222	ENST00000524057	WDR27	A2RRH5	827 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	CASTOR2	A6NHX0	329 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	CCNT1	O60563	726 aa	Known RBP	11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	RPP40	O75818	363 aa	Known RBP	11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	MICAL2	O94851	1124 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	XBP1	P17861	261 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	IGFBP6	P24592	240 aa	Predicted RBP	11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	MPL	P40238	635 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	CCR2	P41597	374 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	SOX9	P48436	509 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	PXN	P49023	591 aa	Predicted RBP	11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	PTEN	P60484	403 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	PSMC5	P62195	406 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	NCBP1	Q09161	790 aa	Known RBP	11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	TUSC3	Q13454	348 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	DGKK	Q5KSL6	1271 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	PDXDC1	Q6P996	788 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	FERMT3	Q86UX7	667 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	CDR2L	Q86X02	465 aa	Predicted RBP	11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	MFSD6L	Q8IWD5	586 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	HACE1	Q8IYU2	909 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	SMARCD2	Q92925	531 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	ZC3H10	Q96K80	434 aa	Known RBP	11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	CEP170P1	Q96L14	293 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	CORO1B	Q9BR76	489 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	TRIM6	Q9C030	488 aa	Predicted RBP	11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	FOXP1	Q9H334	677 aa	Predicted RBP	11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	PARP2	Q9UGN5	583 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	CDY1	Q9Y6F8	540 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	COL4A2	P08572	1712 aa		11.91	□□□□□ -0.5
SORBS3-222	ENST00000524057	ARHGEF37	A1IGU5	675 aa		11.9	□□□□□ -0.5
SORBS3-222	ENST00000524057	EXTL3	O43909	919 aa		11.9	□□□□□ -0.5
SORBS3-222	ENST00000524057	FLNB	O75369	2602 aa	Known RBP	11.9	□□□□□ -0.5
SORBS3-222	ENST00000524057	CEACAM1	P13688	526 aa		11.9	□□□□□ -0.5
SORBS3-222	ENST00000524057	GCFC2	P16383	781 aa	Known RBP	11.9	□□□□□ -0.5
SORBS3-222	ENST00000524057	ARF4	P18085	180 aa	Predicted RBP	11.9	□□□□□ -0.5
SORBS3-222	ENST00000524057	FGFR3	P22607	806 aa		11.9	□□□□□ -0.5
SORBS3-222	ENST00000524057	MCM2	P49736	904 aa		11.9	□□□□□ -0.5
SORBS3-222	ENST00000524057	ELAVL2	Q12926	359 aa	Known RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms