RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 TDRD10Q5VZ19 366 aaKnown RBP11.53□□□□□ -0.56
SPIDR-222ENST00000524006 EFCAB12Q6NXP0 572 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 MPZL3Q6UWV2 235 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 SND1Q7KZF4 910 aaKnown RBP eCLIP11.53□□□□□ -0.56
SPIDR-222ENST00000524006 SLFN11Q7Z7L1 901 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 DNAAF5Q86Y56 855 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 GSPT2Q8IYD1 628 aaKnown RBP11.53□□□□□ -0.56
SPIDR-222ENST00000524006 MSL3Q8N5Y2 521 aaKnown RBP11.53□□□□□ -0.56
SPIDR-222ENST00000524006 FAM71BQ8TC56 605 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 HELQQ8TDG4 1101 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 ARHGEF26Q96DR7 871 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 SYT11Q9BT88 431 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 WNT8AQ9H1J5 351 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 ISCUQ9H1K1 167 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 GOLPH3Q9H4A6 298 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 SLITRK6Q9H5Y7 841 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 OSGEPQ9NPF4 335 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 PRMT7Q9NVM4 692 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-222ENST00000524006 CNOT8Q9UFF9 292 aaKnown RBP11.53□□□□□ -0.56
SPIDR-222ENST00000524006 ZHX1Q9UKY1 873 aaPredicted RBP11.53□□□□□ -0.56
SPIDR-222ENST00000524006 MTUS1Q9ULD2 1270 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 PCDHB2Q9Y5E7 798 aa11.53□□□□□ -0.56
SPIDR-222ENST00000524006 KIAA0100Q14667 2235 aaKnown RBP11.53□□□□□ -0.56
SPIDR-222ENST00000524006 FAM170AA1A519 330 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 GOLGA6BA6NDN3 693 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 THAP12O43422 761 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 SASH3O75995 380 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 LGALS2P05162 132 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 CLTAP09496 248 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 GNA15P30679 374 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 MAPK4P31152 587 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 PLA2G4AP47712 749 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 MCCD1P59942 119 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-222ENST00000524006 TFAMQ00059 246 aaKnown RBP11.52□□□□□ -0.57
SPIDR-222ENST00000524006 SLC7A5Q01650 507 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 FMO1Q01740 532 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 NNTQ13423 1086 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 MOGSQ13724 837 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 KYAT1Q16773 422 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 CLEC16AQ2KHT3 1053 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 ZNF699Q32M78 642 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 Q3C1V9 767 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 ACAD10Q6JQN1 1059 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 CCNI2Q6ZMN8 369 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-222ENST00000524006 MAATS1Q7Z4T9 603 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-222ENST00000524006 RBBP8NLQ8NC74 664 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-222ENST00000524006 OR6J1Q8NGC5 347 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 PPTC7Q8NI37 304 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 CD99L2Q8TCZ2 262 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 IFT81Q8WYA0 676 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 COPS5Q92905 334 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 TATDN2Q93075 761 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 HES6Q96HZ4 224 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 ZBTB45Q96K62 511 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-222ENST00000524006 RNPC3Q96LT9 517 aaKnown RBP11.52□□□□□ -0.57
SPIDR-222ENST00000524006 FGD4Q96M96 766 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 CCDC113Q9H0I3 377 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 RAB17Q9H0T7 212 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 CARD9Q9H257 536 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 RPF1Q9H9Y2 349 aaKnown RBP11.52□□□□□ -0.57
SPIDR-222ENST00000524006 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-222ENST00000524006 FAM53CQ9NYF3 392 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 TAS2R14Q9NYV8 317 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 L1RE1Q9UN81 338 aa11.52□□□□□ -0.57
SPIDR-222ENST00000524006 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
SPIDR-222ENST00000524006 CEP290O15078 2479 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 CCDC66A2RUB6 948 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 BTBD19C9JJ37 291 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 MAP2K7O14733 419 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 ATMINO43313 823 aaPredicted RBP11.51□□□□□ -0.57
SPIDR-222ENST00000524006 OPA1O60313 960 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 MTA2O94776 668 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 CLCN3P51790 818 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 CLDN10P78369 228 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 ARHGAP1Q07960 439 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 CUL1Q13616 776 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 TCEAL1Q15170 157 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 DUOXA2Q1HG44 320 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 CCDC62Q6P9F0 684 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 TMEM270Q6UE05 265 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 C15orf39Q6ZRI6 1047 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 PLEKHH3Q7Z736 793 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 WHAMMQ8TF30 809 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 TRAPPC12Q8WVT3 735 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.51□□□□□ -0.577e-7■■■■■ 70.8
SPIDR-222ENST00000524006 MS4A4AQ96JQ5 239 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 RUNDC3BQ96NL0 473 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 RPS6KC1Q96S38 1066 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 ACO2Q99798 780 aaKnown RBP11.51□□□□□ -0.57
SPIDR-222ENST00000524006 ADPGKQ9BRR6 497 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 NIF3L1Q9GZT8 377 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 EPB41L5Q9HCM4 733 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 MORF4L1Q9UBU8 362 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 STXBP5LQ9Y2K9 1186 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 PTPN22Q9Y2R2 807 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 UTP11Q9Y3A2 253 aaKnown RBP11.51□□□□□ -0.57
SPIDR-222ENST00000524006 SCINQ9Y6U3 715 aa11.51□□□□□ -0.57
SPIDR-222ENST00000524006 GOLGA6L10A6NI86 522 aa11.5□□□□□ -0.57
SPIDR-222ENST00000524006 ACKR2O00590 384 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms