RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 FUKQ8N0W3 1084 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 FITM2Q8N6M3 262 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 MB21D1Q8N884 522 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 PHACTR3Q96KR7 559 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 TEPSINQ96N21 525 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 XYLT2Q9H1B5 865 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 ADAM7Q9H2U9 754 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 GSTO2Q9H4Y5 243 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 KIAA1586Q9HCI6 787 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 SLC52A1Q9NWF4 448 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 ZDHHC8Q9ULC8 765 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 OGDHLQ9ULD0 1010 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 PCDHA6Q9UN73 950 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 PCDHGB6Q9Y5F9 930 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 SLC30A1Q9Y6M5 507 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 NISCHQ9Y2I1 1504 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 GOLGA6L6A8MZA4 724 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 PEX14O75381 377 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 HAUS5O94927 633 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 RPL17P18621 184 aaKnown RBP4.85□□□□□ -1.63
SKP1-212ENST00000523966 HK1P19367 917 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 SLC7A1P30825 629 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 NOMO3P69849 1222 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 FOXL1Q12952 345 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 HABP2Q14520 560 aaPredicted RBP4.85□□□□□ -1.63
SKP1-212ENST00000523966 CCDC93Q567U6 631 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 METTL24Q5JXM2 366 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 ANKS6Q68DC2 871 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 ACRBPQ8NEB7 543 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 SLC35B2Q8TB61 432 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 ATXN2LQ8WWM7 1075 aaKnown RBP4.85□□□□□ -1.63
SKP1-212ENST00000523966 SUCLG2Q96I99 432 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 PSMD1Q99460 953 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 MYOCQ99972 504 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 SIK2Q9H0K1 926 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 ZNF700Q9H0M5 742 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 KCNH6Q9H252 994 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 MRPL46Q9H2W6 279 aaKnown RBP4.85□□□□□ -1.63
SKP1-212ENST00000523966 DEF6Q9H4E7 631 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 ZNF287Q9HBT7 754 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 SH3BP1Q9Y3L3 701 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 SNX13Q9Y5W8 968 aa4.85□□□□□ -1.63
SKP1-212ENST00000523966 ARID4BQ4LE39 1312 aaPredicted RBP4.85□□□□□ -1.63
SKP1-212ENST00000523966 NT5C1B-RDH14C9J2C7 533 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 PMM2O15305 246 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 SLC43A1O75387 559 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 ANXA1P04083 346 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 GJB1P08034 283 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 KITP10721 976 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 BRAFP15056 766 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 COMTP21964 271 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 NEK3P51956 506 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 RHBDL3P58872 404 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 DUSP8Q13202 625 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 CRHR2Q13324 411 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 SEMA5AQ13591 1074 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 CNGB1Q14028 1251 aaPredicted RBP4.84□□□□□ -1.63
SKP1-212ENST00000523966 LCE3BQ5TA77 95 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 UTP14CQ5TAP6 766 aaKnown RBP4.84□□□□□ -1.63
SKP1-212ENST00000523966 FAM90A1Q86YD7 464 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 DCBLD1Q8N8Z6 715 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 RNF169Q8NCN4 708 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 CHST13Q8NET6 341 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 MDGA1Q8NFP4 955 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 OR10H5Q8NGA6 315 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 SVIPQ8NHG7 77 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 PLBD2Q8NHP8 589 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 TBC1D15Q8TC07 691 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 DDX17Q92841 729 aaKnown RBP4.84□□□□□ -1.63
SKP1-212ENST00000523966 MPHOSPH6Q99547 160 aaKnown RBP4.84□□□□□ -1.63
SKP1-212ENST00000523966 NDC1Q9BTX1 674 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 C1orf43Q9BWL3 253 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 BHMT2Q9H2M3 363 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 ZMAT3Q9HA38 289 aaKnown RBP4.84□□□□□ -1.63
SKP1-212ENST00000523966 RSAD1Q9HA92 442 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 RLIMQ9NVW2 624 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 RTEL1Q9NZ71 1219 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 JKAMPQ9P055 326 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 SLC23A1Q9UHI7 598 aa4.84□□□□□ -1.63
SKP1-212ENST00000523966 RHPN2P1A8MT19 583 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 ISM1B1AKI9 464 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 MYO1CO00159 1063 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 FOXN3O00409 490 aaPredicted RBP4.83□□□□□ -1.64
SKP1-212ENST00000523966 GPR42O15529 346 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 FOXS1O43638 330 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 TBC1D4O60343 1298 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 ZNF623O75123 536 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 AHSGP02765 367 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 MYL3P08590 195 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 MYF5P13349 255 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 HIBADHP31937 336 aaKnown RBP4.83□□□□□ -1.64
SKP1-212ENST00000523966 PHKA1P46020 1223 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 AK2P54819 239 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 SOX8P57073 446 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 PSMC1P62191 440 aaKnown RBP4.83□□□□□ -1.64
SKP1-212ENST00000523966 GALEQ14376 348 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 VPS72Q15906 364 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 AMOTQ4VCS5 1084 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 SLC44A4Q53GD3 710 aa4.83□□□□□ -1.64
SKP1-212ENST00000523966 DCAF17Q5H9S7 520 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms