RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 NUP62CLQ9H1M0 184 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 ASB7Q9H672 318 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 LMCD1Q9NZU5 365 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 KIAA1468Q9P260 1216 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 TRAF3IP3Q9Y228 551 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 LZTS1Q9Y250 596 aa13.91□□□□□ -0.18
VEGFA-224ENST00000523873 PER2O15055 1255 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 IL18RAPO95256 599 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 MCM4P33991 863 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 TFAMQ00059 246 aaKnown RBP13.9□□□□□ -0.18
VEGFA-224ENST00000523873 CYP24A1Q07973 514 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 ZCWPW2Q504Y3 356 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 TIGD5Q53EQ6 642 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 SPATA1Q5VX52 437 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 CEP135Q66GS9 1140 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 KLHL10Q6JEL2 608 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 DCLRE1AQ6PJP8 1040 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 ADSSL1Q8N142 457 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 BEST2Q8NFU1 509 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 GOLGA5Q8TBA6 731 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 PLEKHO2Q8TD55 490 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 EEF2KMTQ96G04 330 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 UROC1Q96N76 676 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 POP1Q99575 1024 aaKnown RBP13.9□□□□□ -0.18
VEGFA-224ENST00000523873 NSUN3Q9H649 340 aaKnown RBP13.9□□□□□ -0.18
VEGFA-224ENST00000523873 IGFLR1Q9H665 355 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 DMAC2Q9NW81 257 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 CGNQ9P2M7 1197 aaKnown RBP13.9□□□□□ -0.18
VEGFA-224ENST00000523873 TCF20Q9UGU0 1960 aaKnown RBP13.9□□□□□ -0.18
VEGFA-224ENST00000523873 BRWD1Q9NSI6 2320 aa13.9□□□□□ -0.18
VEGFA-224ENST00000523873 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-224ENST00000523873 CARNS1A5YM72 827 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 C2orf71A6NGG8 1288 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 PPP1R3GB7ZBB8 358 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 TMEM189-UBE2V1I3L0A0 370 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 CXCL14O95715 111 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 SOD2P04179 222 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 CTSAP10619 480 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 CYP3A5P20815 502 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 NR2F2P24468 414 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 LRPAP1P30533 357 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 NRIP1P48552 1158 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 HYAL1Q12794 435 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 SMC1AQ14683 1233 aaKnown RBP13.89□□□□□ -0.19
VEGFA-224ENST00000523873 SKIV2LQ15477 1246 aaKnown RBP13.89□□□□□ -0.19
VEGFA-224ENST00000523873 PTPN14Q15678 1187 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 COBLL1Q53SF7 1204 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 FAM171A1Q5VUB5 890 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 ANKRD40Q6AI12 368 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 CEP57Q86XR8 500 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 OR5B17Q8NGF7 314 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 CCDC127Q96BQ5 260 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
VEGFA-224ENST00000523873 MTMR12Q9C0I1 747 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 GZF1Q9H116 711 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-224ENST00000523873 KIAA1586Q9HCI6 787 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 DPP3Q9NY33 737 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 CTNND2Q9UQB3 1225 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 DERAQ9Y315 318 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 C2CD2Q9Y426 696 aa13.89□□□□□ -0.19
VEGFA-224ENST00000523873 SF3B1O75533 1304 aaKnown RBP eCLIP13.89□□□□□ -0.196e-7■■■■■ 31.1
VEGFA-224ENST00000523873 LINC01565O15544 149 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 XPOTO43592 962 aaKnown RBP13.88□□□□□ -0.19
VEGFA-224ENST00000523873 URODP06132 367 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 DLATP10515 647 aaKnown RBP13.88□□□□□ -0.19
VEGFA-224ENST00000523873 TKTP29401 623 aaKnown RBP13.88□□□□□ -0.19
VEGFA-224ENST00000523873 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
VEGFA-224ENST00000523873 GLUD2P49448 558 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 STX17P56962 302 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 RBM10P98175 930 aaKnown RBP13.88□□□□□ -0.19
VEGFA-224ENST00000523873 POU5F1Q01860 360 aaKnown RBP13.88□□□□□ -0.19
VEGFA-224ENST00000523873 PSMD6Q15008 389 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 RTP2Q5QGT7 225 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 C9orf57Q5W0N0 161 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 CENPPQ6IPU0 288 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 PRSS55Q6UWB4 352 aaPredicted RBP13.88□□□□□ -0.19
VEGFA-224ENST00000523873 SLC9A9Q8IVB4 645 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 GLYCTKQ8IVS8 523 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 NELFBQ8WX92 580 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 MFSD14AQ96MC6 490 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 NUB1Q9Y5A7 615 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 C2orf16Q68DN1 1984 aa13.88□□□□□ -0.19
VEGFA-224ENST00000523873 DOCK6Q96HP0 2047 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 PIRO00625 290 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 SPTLC1O15269 473 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 AKAP3O75969 853 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 ITGB3P05106 788 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 TMEM191BP0C7N4 346 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 RPL17P18621 184 aaKnown RBP13.87□□□□□ -0.19
VEGFA-224ENST00000523873 CCNE1P24864 410 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 POLR2BP30876 1174 aaKnown RBP13.87□□□□□ -0.19
VEGFA-224ENST00000523873 DLG4P78352 724 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 ADAM9Q13443 819 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 KIAA0319Q5VV43 1072 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 KIAA1841Q6NSI8 718 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 EP400NLQ6ZTU2 488 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 MRPL43Q8N983 215 aaKnown RBP13.87□□□□□ -0.19
VEGFA-224ENST00000523873 C1orf127Q8N9H9 656 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 TRIML1Q8N9V2 468 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 RIN2Q8WYP3 895 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms