RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 ATP2B3Q16720 1220 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 FLYWCH1Q4VC44 716 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 IFIT1BQ5T764 474 aaKnown RBP7.05□□□□□ -1.28
CPNE3-207ENST00000523588 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 CHPFQ8IZ52 775 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 C3orf20Q8ND61 904 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 SLC25A43Q8WUT9 341 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-207ENST00000523588 RGMAQ96B86 450 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 KRTAP4-11Q9BYQ6 195 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 ANLNQ9NQW6 1124 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 KLHL11Q9NVR0 708 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 KLHL42Q9P2K6 505 aa7.05□□□□□ -1.28
CPNE3-207ENST00000523588 USP15Q9Y4E8 981 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-207ENST00000523588 F2RL2O00254 374 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 AP1G1O43747 822 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 NARSO43776 548 aaKnown RBP7.04□□□□□ -1.28
CPNE3-207ENST00000523588 SLC43A1O75387 559 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 RPS6KA4O75676 772 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 MTHFD1P11586 935 aaKnown RBP7.04□□□□□ -1.28
CPNE3-207ENST00000523588 NOGQ13253 232 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 GTF2H3Q13889 308 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 FAM102BQ5T8I3 360 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 THEMIS2Q5TEJ8 643 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 TSHZ3Q63HK5 1081 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 LRRC55Q6ZSA7 311 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 NLGN4YQ8NFZ3 816 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-207ENST00000523588 OR56A1Q8NGH5 318 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 MAP3K14Q99558 947 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 ZNF341Q9BYN7 854 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 METTL14Q9HCE5 456 aaKnown RBP7.04□□□□□ -1.28
CPNE3-207ENST00000523588 SLC2A4RGQ9NR83 387 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 NOB1Q9ULX3 412 aaKnown RBP7.04□□□□□ -1.28
CPNE3-207ENST00000523588 POLHQ9Y253 713 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 PCDHA3Q9Y5H8 950 aa7.04□□□□□ -1.28
CPNE3-207ENST00000523588 CCDC78A2IDD5 438 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 NPIPB8E9PQR5 432 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 TSPAN6O43657 245 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 NCR1O76036 304 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 FTLP02792 175 aaPredicted RBP7.03□□□□□ -1.28
CPNE3-207ENST00000523588 TACR2P21452 398 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 CXorf57Q6NSI4 855 aaKnown RBP7.03□□□□□ -1.28
CPNE3-207ENST00000523588 SLC4A10Q6U841 1118 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 RHOUQ7L0Q8 258 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 GRAMD1CQ8IYS0 662 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 FITM2Q8N6M3 262 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 SLC35G2Q8TBE7 412 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 DIS3LQ8TF46 1054 aaKnown RBP7.03□□□□□ -1.28
CPNE3-207ENST00000523588 C1GALT1C1Q96EU7 318 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 LRGUKQ96M69 825 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 FAM193BQ96PV7 902 aaPredicted RBP7.03□□□□□ -1.28
CPNE3-207ENST00000523588 NMRK2Q9NPI5 230 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 AKIP1Q9NQ31 210 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 MAN1C1Q9NR34 630 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 DKK2Q9UBU2 259 aa7.03□□□□□ -1.28
CPNE3-207ENST00000523588 GAGE12BA1L429 117 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 CDHR4A6H8M9 788 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 GAGE12HA6NDE8 117 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 RNASET2O00584 256 aaKnown RBP7.02□□□□□ -1.29
CPNE3-207ENST00000523588 HAUS5O94927 633 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 ARIH2O95376 493 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 ALDH2P05091 517 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 ELANEP08246 267 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 CKBP12277 381 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 C6P13671 934 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 HSPA6P17066 643 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 NOMO3P69849 1222 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 ZXDAP98168 799 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 SLFN5Q08AF3 891 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 NOMO2Q5JPE7 1267 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 NXNQ6DKJ4 435 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 HEATR3Q7Z4Q2 680 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 LENG9Q96B70 501 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 JKAMPQ9P055 326 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 TCEAL9Q9UHQ7 104 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 SLC45A2Q9UMX9 530 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 FZD1Q9UP38 647 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 ATP11BQ9Y2G3 1177 aa7.02□□□□□ -1.29
CPNE3-207ENST00000523588 MARCH11A6NNE9 402 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 BEAN1Q3B7T3 259 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 UTP14CQ5TAP6 766 aaKnown RBP7.01□□□□□ -1.29
CPNE3-207ENST00000523588 FAM90A1Q86YD7 464 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 TCEAL8Q8IYN2 117 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 TBC1D15Q8TC07 691 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 ZNF483Q8TF39 744 aaPredicted RBP7.01□□□□□ -1.29
CPNE3-207ENST00000523588 NUP133Q8WUM0 1156 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 CLIP3Q96DZ5 547 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 TAAR9Q96RI9 348 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 PACSIN1Q9BY11 444 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 MMRN2Q9H8L6 949 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 KMT5AQ9NQR1 393 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 SIDT1Q9NXL6 827 aaKnown RBP7.01□□□□□ -1.29
CPNE3-207ENST00000523588 HS3ST4Q9Y661 456 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 FPGT-TNNI3KV9GXZ4 949 aa7.01□□□□□ -1.29
CPNE3-207ENST00000523588 A0A1B0GTW7 788 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 PRSS29PA6NIE9 313 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 TMEM200CA6NKL6 621 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 AGFG2O95081 481 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 CFIP05156 583 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 FTH1P19P0C7X4 201 aa7□□□□□ -1.29
CPNE3-207ENST00000523588 SPATA31D3P0C874 917 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms